Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Limk2O54785 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Limk2O54785 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Limk2O54785 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Limk2O54785 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Limk2O54785 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.03■□□□□ 0.96
Limk2O54785 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Limk2O54785 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Limk2O54785 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.03■□□□□ 0.96
Limk2O54785 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Limk2O54785 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.02■□□□□ 0.96
Limk2O54785 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Limk2O54785 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Limk2O54785 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.02■□□□□ 0.96
Limk2O54785 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Limk2O54785 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Limk2O54785 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Limk2O54785 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Limk2O54785 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Limk2O54785 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Limk2O54785 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Limk2O54785 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.01■□□□□ 0.95
Limk2O54785 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Limk2O54785 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Limk2O54785 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Limk2O54785 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.01■□□□□ 0.95
Limk2O54785 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Limk2O54785 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Limk2O54785 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21■□□□□ 0.95
Limk2O54785 Gm5913-201ENSMUST00000119397 1399 ntBASIC21■□□□□ 0.95
Limk2O54785 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21■□□□□ 0.95
Limk2O54785 Gm21956-201ENSMUST00000179946 522 ntBASIC21■□□□□ 0.95
Limk2O54785 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21■□□□□ 0.95
Limk2O54785 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21■□□□□ 0.95
Limk2O54785 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Limk2O54785 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21■□□□□ 0.95
Limk2O54785 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Limk2O54785 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
Limk2O54785 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.99■□□□□ 0.95
Limk2O54785 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Limk2O54785 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Limk2O54785 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Limk2O54785 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Limk2O54785 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Limk2O54785 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Limk2O54785 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.98■□□□□ 0.95
Limk2O54785 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Limk2O54785 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Limk2O54785 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Limk2O54785 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Limk2O54785 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Limk2O54785 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Limk2O54785 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Limk2O54785 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Limk2O54785 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Limk2O54785 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Limk2O54785 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Limk2O54785 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Limk2O54785 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Limk2O54785 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Limk2O54785 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Limk2O54785 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Limk2O54785 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Limk2O54785 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.96■□□□□ 0.95
Limk2O54785 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.96■□□□□ 0.95
Limk2O54785 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Limk2O54785 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Limk2O54785 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Limk2O54785 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Limk2O54785 Gm12922-201ENSMUST00000120626 809 ntBASIC20.95■□□□□ 0.94
Limk2O54785 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Limk2O54785 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Limk2O54785 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Limk2O54785 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.95■□□□□ 0.94
Limk2O54785 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Limk2O54785 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Limk2O54785 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Limk2O54785 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.94■□□□□ 0.94
Limk2O54785 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.94■□□□□ 0.94
Limk2O54785 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Limk2O54785 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Limk2O54785 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Limk2O54785 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Limk2O54785 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.93■□□□□ 0.94
Limk2O54785 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Limk2O54785 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.93■□□□□ 0.94
Limk2O54785 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Limk2O54785 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Limk2O54785 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Limk2O54785 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Limk2O54785 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.92■□□□□ 0.94
Limk2O54785 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Limk2O54785 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.92■□□□□ 0.94
Limk2O54785 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Limk2O54785 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Limk2O54785 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.92■□□□□ 0.94
Limk2O54785 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Limk2O54785 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Limk2O54785 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Limk2O54785 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms