Protein–RNA interactions for Protein: O35609

Scamp3, Secretory carrier-associated membrane protein 3, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp3O35609 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Scamp3O35609 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scamp3O35609 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scamp3O35609 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scamp3O35609 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.49■□□□□ 0.87
Scamp3O35609 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scamp3O35609 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scamp3O35609 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scamp3O35609 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.48■□□□□ 0.87
Scamp3O35609 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Scamp3O35609 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scamp3O35609 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scamp3O35609 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.48■□□□□ 0.87
Scamp3O35609 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scamp3O35609 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Scamp3O35609 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scamp3O35609 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scamp3O35609 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scamp3O35609 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scamp3O35609 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scamp3O35609 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scamp3O35609 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scamp3O35609 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scamp3O35609 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scamp3O35609 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scamp3O35609 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Scamp3O35609 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scamp3O35609 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Scamp3O35609 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scamp3O35609 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scamp3O35609 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scamp3O35609 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Scamp3O35609 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.46■□□□□ 0.87
Scamp3O35609 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.46■□□□□ 0.87
Scamp3O35609 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.46■□□□□ 0.87
Scamp3O35609 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scamp3O35609 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scamp3O35609 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.46■□□□□ 0.87
Scamp3O35609 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Scamp3O35609 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.45■□□□□ 0.86
Scamp3O35609 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Scamp3O35609 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scamp3O35609 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.45■□□□□ 0.86
Scamp3O35609 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Scamp3O35609 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.45■□□□□ 0.86
Scamp3O35609 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Scamp3O35609 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scamp3O35609 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scamp3O35609 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Scamp3O35609 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.44■□□□□ 0.86
Scamp3O35609 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scamp3O35609 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scamp3O35609 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Scamp3O35609 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scamp3O35609 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
Scamp3O35609 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scamp3O35609 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Scamp3O35609 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Scamp3O35609 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.43■□□□□ 0.86
Scamp3O35609 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scamp3O35609 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scamp3O35609 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Scamp3O35609 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scamp3O35609 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scamp3O35609 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Scamp3O35609 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scamp3O35609 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.42■□□□□ 0.86
Scamp3O35609 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.42■□□□□ 0.86
Scamp3O35609 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scamp3O35609 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Scamp3O35609 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.42■□□□□ 0.86
Scamp3O35609 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.41■□□□□ 0.86
Scamp3O35609 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scamp3O35609 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scamp3O35609 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scamp3O35609 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scamp3O35609 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scamp3O35609 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scamp3O35609 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Scamp3O35609 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Scamp3O35609 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Scamp3O35609 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.4■□□□□ 0.86
Scamp3O35609 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scamp3O35609 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scamp3O35609 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scamp3O35609 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scamp3O35609 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scamp3O35609 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scamp3O35609 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Scamp3O35609 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scamp3O35609 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scamp3O35609 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scamp3O35609 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Scamp3O35609 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Scamp3O35609 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scamp3O35609 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Scamp3O35609 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Scamp3O35609 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scamp3O35609 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.37■□□□□ 0.85
Scamp3O35609 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms