Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Prrt1O35449 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prrt1O35449 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prrt1O35449 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Prrt1O35449 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.44■□□□□ 0.38
Prrt1O35449 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prrt1O35449 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prrt1O35449 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prrt1O35449 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prrt1O35449 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prrt1O35449 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prrt1O35449 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prrt1O35449 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prrt1O35449 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prrt1O35449 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prrt1O35449 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.43■□□□□ 0.38
Prrt1O35449 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prrt1O35449 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Prrt1O35449 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prrt1O35449 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Prrt1O35449 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Prrt1O35449 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.42■□□□□ 0.38
Prrt1O35449 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Prrt1O35449 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prrt1O35449 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Prrt1O35449 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prrt1O35449 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prrt1O35449 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prrt1O35449 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prrt1O35449 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Prrt1O35449 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prrt1O35449 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prrt1O35449 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prrt1O35449 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prrt1O35449 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Prrt1O35449 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prrt1O35449 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
Prrt1O35449 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prrt1O35449 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.41■□□□□ 0.38
Prrt1O35449 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Prrt1O35449 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Prrt1O35449 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prrt1O35449 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prrt1O35449 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Prrt1O35449 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prrt1O35449 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Prrt1O35449 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Prrt1O35449 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Prrt1O35449 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prrt1O35449 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prrt1O35449 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.4■□□□□ 0.38
Prrt1O35449 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Prrt1O35449 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Prrt1O35449 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prrt1O35449 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.4■□□□□ 0.38
Prrt1O35449 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.4■□□□□ 0.38
Prrt1O35449 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prrt1O35449 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prrt1O35449 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prrt1O35449 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.4■□□□□ 0.38
Prrt1O35449 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prrt1O35449 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Prrt1O35449 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prrt1O35449 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Prrt1O35449 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prrt1O35449 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prrt1O35449 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prrt1O35449 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prrt1O35449 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Prrt1O35449 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Prrt1O35449 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.39■□□□□ 0.37
Prrt1O35449 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prrt1O35449 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prrt1O35449 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prrt1O35449 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prrt1O35449 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.38■□□□□ 0.37
Prrt1O35449 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.38■□□□□ 0.37
Prrt1O35449 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prrt1O35449 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prrt1O35449 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Prrt1O35449 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Prrt1O35449 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prrt1O35449 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prrt1O35449 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.37■□□□□ 0.37
Prrt1O35449 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Prrt1O35449 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Prrt1O35449 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prrt1O35449 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.36■□□□□ 0.37
Prrt1O35449 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prrt1O35449 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Prrt1O35449 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prrt1O35449 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Prrt1O35449 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Prrt1O35449 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prrt1O35449 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prrt1O35449 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Prrt1O35449 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prrt1O35449 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Prrt1O35449 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prrt1O35449 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms