Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Capn1O35350 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Capn1O35350 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Capn1O35350 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.01■□□□□ 0.63
Capn1O35350 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.01■□□□□ 0.63
Capn1O35350 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Capn1O35350 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.01■□□□□ 0.63
Capn1O35350 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Capn1O35350 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.01■□□□□ 0.63
Capn1O35350 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Capn1O35350 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Capn1O35350 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Capn1O35350 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Capn1O35350 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Capn1O35350 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Capn1O35350 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Capn1O35350 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19■□□□□ 0.63
Capn1O35350 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Capn1O35350 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Capn1O35350 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Capn1O35350 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Capn1O35350 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.99■□□□□ 0.63
Capn1O35350 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Capn1O35350 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.99■□□□□ 0.63
Capn1O35350 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Capn1O35350 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Capn1O35350 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Capn1O35350 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Capn1O35350 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.98■□□□□ 0.63
Capn1O35350 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Capn1O35350 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Capn1O35350 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Capn1O35350 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Capn1O35350 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Capn1O35350 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Capn1O35350 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.98■□□□□ 0.63
Capn1O35350 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Capn1O35350 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Capn1O35350 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Capn1O35350 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Capn1O35350 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Capn1O35350 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Capn1O35350 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Capn1O35350 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Capn1O35350 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Capn1O35350 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Capn1O35350 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.96■□□□□ 0.63
Capn1O35350 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Capn1O35350 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.96■□□□□ 0.63
Capn1O35350 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
Capn1O35350 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Capn1O35350 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Capn1O35350 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Capn1O35350 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Capn1O35350 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Capn1O35350 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Capn1O35350 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Capn1O35350 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Capn1O35350 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Capn1O35350 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Capn1O35350 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.95■□□□□ 0.62
Capn1O35350 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.95■□□□□ 0.62
Capn1O35350 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.95■□□□□ 0.62
Capn1O35350 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.95■□□□□ 0.62
Capn1O35350 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Capn1O35350 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Capn1O35350 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Capn1O35350 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Capn1O35350 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Capn1O35350 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Capn1O35350 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Capn1O35350 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Capn1O35350 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Capn1O35350 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.94■□□□□ 0.62
Capn1O35350 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.94■□□□□ 0.62
Capn1O35350 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Capn1O35350 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Capn1O35350 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.94■□□□□ 0.62
Capn1O35350 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Capn1O35350 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Capn1O35350 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.93■□□□□ 0.62
Capn1O35350 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.93■□□□□ 0.62
Capn1O35350 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.93■□□□□ 0.62
Capn1O35350 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.93■□□□□ 0.62
Capn1O35350 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Capn1O35350 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Capn1O35350 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Capn1O35350 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Capn1O35350 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Capn1O35350 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
Capn1O35350 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Capn1O35350 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Capn1O35350 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Capn1O35350 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Capn1O35350 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.92■□□□□ 0.62
Capn1O35350 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.92■□□□□ 0.62
Capn1O35350 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Capn1O35350 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Capn1O35350 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Capn1O35350 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms