Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
Ercc2O08811 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ercc2O08811 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.2■□□□□ 0.98
Ercc2O08811 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ercc2O08811 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ercc2O08811 Gm9959-201ENSMUST00000068277 390 ntBASIC21.2■□□□□ 0.98
Ercc2O08811 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ercc2O08811 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ercc2O08811 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ercc2O08811 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ercc2O08811 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ercc2O08811 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.2■□□□□ 0.98
Ercc2O08811 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Ercc2O08811 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ercc2O08811 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ercc2O08811 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Ercc2O08811 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.19■□□□□ 0.98
Ercc2O08811 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ercc2O08811 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ercc2O08811 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ercc2O08811 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ercc2O08811 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.18■□□□□ 0.98
Ercc2O08811 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ercc2O08811 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.18■□□□□ 0.98
Ercc2O08811 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ercc2O08811 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ercc2O08811 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Ercc2O08811 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ercc2O08811 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.17■□□□□ 0.98
Ercc2O08811 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
Ercc2O08811 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ercc2O08811 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ercc2O08811 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.16■□□□□ 0.98
Ercc2O08811 Etf1-202ENSMUST00000180351 108 ntBASIC21.16■□□□□ 0.98
Ercc2O08811 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ercc2O08811 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ercc2O08811 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Ercc2O08811 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ercc2O08811 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ercc2O08811 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ercc2O08811 Gm7417-201ENSMUST00000192950 473 ntBASIC21.15■□□□□ 0.98
Ercc2O08811 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.15■□□□□ 0.98
Ercc2O08811 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ercc2O08811 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ercc2O08811 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ercc2O08811 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ercc2O08811 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ercc2O08811 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.14■□□□□ 0.98
Ercc2O08811 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ercc2O08811 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ercc2O08811 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Ercc2O08811 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Ercc2O08811 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ercc2O08811 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Ercc2O08811 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ercc2O08811 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Ercc2O08811 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.13■□□□□ 0.97
Ercc2O08811 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ercc2O08811 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ercc2O08811 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ercc2O08811 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ercc2O08811 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ercc2O08811 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ercc2O08811 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Ercc2O08811 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ercc2O08811 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ercc2O08811 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ercc2O08811 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ercc2O08811 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ercc2O08811 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ercc2O08811 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ercc2O08811 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ercc2O08811 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ercc2O08811 Gm45102-201ENSMUST00000207427 857 ntBASIC21.1■□□□□ 0.97
Ercc2O08811 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.1■□□□□ 0.97
Ercc2O08811 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ercc2O08811 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.09■□□□□ 0.97
Ercc2O08811 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.09■□□□□ 0.97
Ercc2O08811 Gm14117-201ENSMUST00000122417 843 ntBASIC21.09■□□□□ 0.97
Ercc2O08811 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ercc2O08811 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.09■□□□□ 0.97
Ercc2O08811 Rps24-207ENSMUST00000224568 714 ntBASIC21.09■□□□□ 0.97
Ercc2O08811 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ercc2O08811 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ercc2O08811 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ercc2O08811 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ercc2O08811 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ercc2O08811 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ercc2O08811 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.08■□□□□ 0.97
Ercc2O08811 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.08■□□□□ 0.97
Ercc2O08811 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ercc2O08811 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ercc2O08811 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ercc2O08811 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ercc2O08811 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ercc2O08811 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.06■□□□□ 0.96
Ercc2O08811 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ercc2O08811 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.06■□□□□ 0.96
Ercc2O08811 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ercc2O08811 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms