Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.04■□□□□ 0.96
Trim55G3X8Y1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Trim55G3X8Y1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim55G3X8Y1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim55G3X8Y1 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.03■□□□□ 0.96
Trim55G3X8Y1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim55G3X8Y1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Trim55G3X8Y1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim55G3X8Y1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Trim55G3X8Y1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.03■□□□□ 0.96
Trim55G3X8Y1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim55G3X8Y1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.02■□□□□ 0.96
Trim55G3X8Y1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim55G3X8Y1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim55G3X8Y1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim55G3X8Y1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim55G3X8Y1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim55G3X8Y1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Trim55G3X8Y1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim55G3X8Y1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim55G3X8Y1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim55G3X8Y1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Trim55G3X8Y1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim55G3X8Y1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim55G3X8Y1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.01■□□□□ 0.95
Trim55G3X8Y1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim55G3X8Y1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim55G3X8Y1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim55G3X8Y1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim55G3X8Y1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim55G3X8Y1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim55G3X8Y1 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Trim55G3X8Y1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim55G3X8Y1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim55G3X8Y1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim55G3X8Y1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim55G3X8Y1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim55G3X8Y1 Gm37136-201ENSMUST00000194368 194 ntBASIC21■□□□□ 0.95
Trim55G3X8Y1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim55G3X8Y1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim55G3X8Y1 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.99■□□□□ 0.95
Trim55G3X8Y1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim55G3X8Y1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim55G3X8Y1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim55G3X8Y1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Trim55G3X8Y1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim55G3X8Y1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim55G3X8Y1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Trim55G3X8Y1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim55G3X8Y1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Trim55G3X8Y1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim55G3X8Y1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim55G3X8Y1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim55G3X8Y1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim55G3X8Y1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim55G3X8Y1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Trim55G3X8Y1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.98■□□□□ 0.95
Trim55G3X8Y1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim55G3X8Y1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim55G3X8Y1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim55G3X8Y1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim55G3X8Y1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.98■□□□□ 0.95
Trim55G3X8Y1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim55G3X8Y1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim55G3X8Y1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.97■□□□□ 0.95
Trim55G3X8Y1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim55G3X8Y1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.97■□□□□ 0.95
Trim55G3X8Y1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim55G3X8Y1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Trim55G3X8Y1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim55G3X8Y1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim55G3X8Y1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Trim55G3X8Y1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim55G3X8Y1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.96■□□□□ 0.95
Trim55G3X8Y1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim55G3X8Y1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim55G3X8Y1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Trim55G3X8Y1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim55G3X8Y1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim55G3X8Y1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim55G3X8Y1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim55G3X8Y1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim55G3X8Y1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim55G3X8Y1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Trim55G3X8Y1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim55G3X8Y1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim55G3X8Y1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim55G3X8Y1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.95■□□□□ 0.94
Trim55G3X8Y1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim55G3X8Y1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim55G3X8Y1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
Trim55G3X8Y1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim55G3X8Y1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.95■□□□□ 0.94
Trim55G3X8Y1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Trim55G3X8Y1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim55G3X8Y1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim55G3X8Y1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim55G3X8Y1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim55G3X8Y1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Trim55G3X8Y1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms