Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh1F7BJK1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh1F7BJK1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh1F7BJK1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh1F7BJK1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.6■□□□□ 0.57
Pcdh1F7BJK1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Pcdh1F7BJK1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Pcdh1F7BJK1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.6■□□□□ 0.57
Pcdh1F7BJK1 Gm11175-201ENSMUST00000116172 543 ntBASIC18.6■□□□□ 0.57
Pcdh1F7BJK1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.6■□□□□ 0.57
Pcdh1F7BJK1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh1F7BJK1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh1F7BJK1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh1F7BJK1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh1F7BJK1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.6■□□□□ 0.57
Pcdh1F7BJK1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh1F7BJK1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh1F7BJK1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh1F7BJK1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh1F7BJK1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh1F7BJK1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh1F7BJK1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh1F7BJK1 Mir6538-201ENSMUST00000183713 110 ntBASIC18.59■□□□□ 0.57
Pcdh1F7BJK1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
Pcdh1F7BJK1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh1F7BJK1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh1F7BJK1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh1F7BJK1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh1F7BJK1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Pcdh1F7BJK1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Pcdh1F7BJK1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.58■□□□□ 0.57
Pcdh1F7BJK1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh1F7BJK1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh1F7BJK1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh1F7BJK1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh1F7BJK1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh1F7BJK1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Pcdh1F7BJK1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh1F7BJK1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Pcdh1F7BJK1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh1F7BJK1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Pcdh1F7BJK1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Pcdh1F7BJK1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pcdh1F7BJK1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh1F7BJK1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh1F7BJK1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.57■□□□□ 0.56
Pcdh1F7BJK1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh1F7BJK1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh1F7BJK1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Pcdh1F7BJK1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh1F7BJK1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh1F7BJK1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh1F7BJK1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh1F7BJK1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Pcdh1F7BJK1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh1F7BJK1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh1F7BJK1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh1F7BJK1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh1F7BJK1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.55■□□□□ 0.56
Pcdh1F7BJK1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh1F7BJK1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh1F7BJK1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh1F7BJK1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh1F7BJK1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.55■□□□□ 0.56
Pcdh1F7BJK1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
Pcdh1F7BJK1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.55■□□□□ 0.56
Pcdh1F7BJK1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh1F7BJK1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh1F7BJK1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh1F7BJK1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Pcdh1F7BJK1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh1F7BJK1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh1F7BJK1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdh1F7BJK1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdh1F7BJK1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh1F7BJK1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh1F7BJK1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh1F7BJK1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh1F7BJK1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh1F7BJK1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh1F7BJK1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh1F7BJK1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.53■□□□□ 0.56
Pcdh1F7BJK1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh1F7BJK1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh1F7BJK1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh1F7BJK1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh1F7BJK1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Pcdh1F7BJK1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh1F7BJK1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh1F7BJK1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh1F7BJK1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Pcdh1F7BJK1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdh1F7BJK1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdh1F7BJK1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh1F7BJK1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh1F7BJK1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh1F7BJK1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh1F7BJK1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pcdh1F7BJK1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.51■□□□□ 0.55
Pcdh1F7BJK1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms