Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc188F6WEU2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc188F6WEU2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc188F6WEU2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc188F6WEU2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc188F6WEU2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Ccdc188F6WEU2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc188F6WEU2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc188F6WEU2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.46■■□□□ 1.03
Ccdc188F6WEU2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc188F6WEU2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.45■■□□□ 1.03
Ccdc188F6WEU2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.45■■□□□ 1.02
Ccdc188F6WEU2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Ccdc188F6WEU2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Ccdc188F6WEU2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.45■■□□□ 1.02
Ccdc188F6WEU2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21.45■■□□□ 1.02
Ccdc188F6WEU2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Ccdc188F6WEU2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.45■■□□□ 1.02
Ccdc188F6WEU2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.45■■□□□ 1.02
Ccdc188F6WEU2 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.44■■□□□ 1.02
Ccdc188F6WEU2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc188F6WEU2 Gm20760-201ENSMUST00000179197 648 ntBASIC21.44■■□□□ 1.02
Ccdc188F6WEU2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.44■■□□□ 1.02
Ccdc188F6WEU2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc188F6WEU2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Ccdc188F6WEU2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc188F6WEU2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Ccdc188F6WEU2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.43■■□□□ 1.02
Ccdc188F6WEU2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.43■■□□□ 1.02
Ccdc188F6WEU2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc188F6WEU2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.43■■□□□ 1.02
Ccdc188F6WEU2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc188F6WEU2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Ccdc188F6WEU2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc188F6WEU2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc188F6WEU2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc188F6WEU2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc188F6WEU2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc188F6WEU2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC21.41■■□□□ 1.02
Ccdc188F6WEU2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.41■■□□□ 1.02
Ccdc188F6WEU2 Gm12527-201ENSMUST00000117967 564 ntBASIC21.4■■□□□ 1.02
Ccdc188F6WEU2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc188F6WEU2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.4■■□□□ 1.02
Ccdc188F6WEU2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc188F6WEU2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.4■■□□□ 1.02
Ccdc188F6WEU2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ccdc188F6WEU2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ccdc188F6WEU2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ccdc188F6WEU2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc188F6WEU2 Mir6982-201ENSMUST00000184354 68 ntBASIC21.39■■□□□ 1.01
Ccdc188F6WEU2 Gm8520-201ENSMUST00000186517 868 ntBASIC21.39■■□□□ 1.01
Ccdc188F6WEU2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc188F6WEU2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Ccdc188F6WEU2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc188F6WEU2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc188F6WEU2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc188F6WEU2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc188F6WEU2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.38■■□□□ 1.01
Ccdc188F6WEU2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc188F6WEU2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.38■■□□□ 1.01
Ccdc188F6WEU2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc188F6WEU2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc188F6WEU2 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.37■■□□□ 1.01
Ccdc188F6WEU2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
Ccdc188F6WEU2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc188F6WEU2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc188F6WEU2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.37■■□□□ 1.01
Ccdc188F6WEU2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.37■■□□□ 1.01
Ccdc188F6WEU2 Gm4968-201ENSMUST00000071458 858 ntBASIC21.37■■□□□ 1.01
Ccdc188F6WEU2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.37■■□□□ 1.01
Ccdc188F6WEU2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Ccdc188F6WEU2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc188F6WEU2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.36■■□□□ 1.01
Ccdc188F6WEU2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc188F6WEU2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc188F6WEU2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc188F6WEU2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc188F6WEU2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc188F6WEU2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Ccdc188F6WEU2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc188F6WEU2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc188F6WEU2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc188F6WEU2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Ccdc188F6WEU2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc188F6WEU2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.34■■□□□ 1.01
Ccdc188F6WEU2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc188F6WEU2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Ccdc188F6WEU2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc188F6WEU2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc188F6WEU2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc188F6WEU2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.33■■□□□ 1.01
Ccdc188F6WEU2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc188F6WEU2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.33■■□□□ 1
Ccdc188F6WEU2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.32■■□□□ 1
Ccdc188F6WEU2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccdc188F6WEU2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc188F6WEU2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccdc188F6WEU2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.32■■□□□ 1
Ccdc188F6WEU2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccdc188F6WEU2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms