Protein–RNA interactions for Protein: E9PXX9

Slc28a1, Sodium/nucleoside cotransporter, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a1E9PXX9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc28a1E9PXX9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Slc28a1E9PXX9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc28a1E9PXX9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.47■□□□□ 0.71
Slc28a1E9PXX9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc28a1E9PXX9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.47■□□□□ 0.71
Slc28a1E9PXX9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc28a1E9PXX9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.47■□□□□ 0.71
Slc28a1E9PXX9 Iqck-206ENSMUST00000208658 2891 ntBASIC19.47■□□□□ 0.71
Slc28a1E9PXX9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc28a1E9PXX9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Slc28a1E9PXX9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc28a1E9PXX9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc28a1E9PXX9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc28a1E9PXX9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc28a1E9PXX9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc28a1E9PXX9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc28a1E9PXX9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc28a1E9PXX9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc28a1E9PXX9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Slc28a1E9PXX9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Slc28a1E9PXX9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc28a1E9PXX9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc28a1E9PXX9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc28a1E9PXX9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Slc28a1E9PXX9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc28a1E9PXX9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc28a1E9PXX9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Slc28a1E9PXX9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Slc28a1E9PXX9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Slc28a1E9PXX9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.44■□□□□ 0.7
Slc28a1E9PXX9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Slc28a1E9PXX9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.44■□□□□ 0.7
Slc28a1E9PXX9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc28a1E9PXX9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Slc28a1E9PXX9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc28a1E9PXX9 Golph3-202ENSMUST00000226517 2359 ntBASIC19.43■□□□□ 0.7
Slc28a1E9PXX9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc28a1E9PXX9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.43■□□□□ 0.7
Slc28a1E9PXX9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Slc28a1E9PXX9 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.43■□□□□ 0.7
Slc28a1E9PXX9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc28a1E9PXX9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc28a1E9PXX9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc28a1E9PXX9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slc28a1E9PXX9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Slc28a1E9PXX9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slc28a1E9PXX9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slc28a1E9PXX9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slc28a1E9PXX9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Slc28a1E9PXX9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Slc28a1E9PXX9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc28a1E9PXX9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc28a1E9PXX9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc28a1E9PXX9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc28a1E9PXX9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc28a1E9PXX9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc28a1E9PXX9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc28a1E9PXX9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc28a1E9PXX9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc28a1E9PXX9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc28a1E9PXX9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc28a1E9PXX9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc28a1E9PXX9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Slc28a1E9PXX9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.41■□□□□ 0.7
Slc28a1E9PXX9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc28a1E9PXX9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Slc28a1E9PXX9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc28a1E9PXX9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.41■□□□□ 0.7
Slc28a1E9PXX9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Slc28a1E9PXX9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Slc28a1E9PXX9 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.4■□□□□ 0.7
Slc28a1E9PXX9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc28a1E9PXX9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc28a1E9PXX9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc28a1E9PXX9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc28a1E9PXX9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Slc28a1E9PXX9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Slc28a1E9PXX9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.39■□□□□ 0.69
Slc28a1E9PXX9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Slc28a1E9PXX9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Slc28a1E9PXX9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.39■□□□□ 0.69
Slc28a1E9PXX9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Slc28a1E9PXX9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc28a1E9PXX9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Slc28a1E9PXX9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc28a1E9PXX9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc28a1E9PXX9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc28a1E9PXX9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc28a1E9PXX9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc28a1E9PXX9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Slc28a1E9PXX9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Slc28a1E9PXX9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc28a1E9PXX9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc28a1E9PXX9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Slc28a1E9PXX9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc28a1E9PXX9 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.37■□□□□ 0.69
Slc28a1E9PXX9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Slc28a1E9PXX9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc28a1E9PXX9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms