Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.82■■□□□ 1.08
Col4a6B1AVK5 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.82■■□□□ 1.08
Col4a6B1AVK5 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col4a6B1AVK5 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.82■■□□□ 1.08
Col4a6B1AVK5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col4a6B1AVK5 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Col4a6B1AVK5 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col4a6B1AVK5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col4a6B1AVK5 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.82■■□□□ 1.08
Col4a6B1AVK5 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col4a6B1AVK5 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col4a6B1AVK5 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Col4a6B1AVK5 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.82■■□□□ 1.08
Col4a6B1AVK5 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col4a6B1AVK5 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Col4a6B1AVK5 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col4a6B1AVK5 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col4a6B1AVK5 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
Col4a6B1AVK5 Gm10849-201ENSMUST00000100397 618 ntBASIC21.81■■□□□ 1.08
Col4a6B1AVK5 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.81■■□□□ 1.08
Col4a6B1AVK5 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Col4a6B1AVK5 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col4a6B1AVK5 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col4a6B1AVK5 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col4a6B1AVK5 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.8■■□□□ 1.08
Col4a6B1AVK5 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
Col4a6B1AVK5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Col4a6B1AVK5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col4a6B1AVK5 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col4a6B1AVK5 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Col4a6B1AVK5 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col4a6B1AVK5 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.79■■□□□ 1.08
Col4a6B1AVK5 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.79■■□□□ 1.08
Col4a6B1AVK5 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col4a6B1AVK5 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col4a6B1AVK5 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.79■■□□□ 1.08
Col4a6B1AVK5 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.79■■□□□ 1.08
Col4a6B1AVK5 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col4a6B1AVK5 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Col4a6B1AVK5 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col4a6B1AVK5 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col4a6B1AVK5 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col4a6B1AVK5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Col4a6B1AVK5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col4a6B1AVK5 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Col4a6B1AVK5 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col4a6B1AVK5 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col4a6B1AVK5 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Col4a6B1AVK5 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.77■■□□□ 1.08
Col4a6B1AVK5 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col4a6B1AVK5 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col4a6B1AVK5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Col4a6B1AVK5 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Col4a6B1AVK5 Gm26833-201ENSMUST00000180899 440 ntBASIC21.76■■□□□ 1.07
Col4a6B1AVK5 Gm7291-201ENSMUST00000199147 382 ntBASIC21.76■■□□□ 1.07
Col4a6B1AVK5 Gm10493-201ENSMUST00000097270 612 ntBASIC21.76■■□□□ 1.07
Col4a6B1AVK5 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Col4a6B1AVK5 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Col4a6B1AVK5 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.75■■□□□ 1.07
Col4a6B1AVK5 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col4a6B1AVK5 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col4a6B1AVK5 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col4a6B1AVK5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col4a6B1AVK5 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col4a6B1AVK5 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col4a6B1AVK5 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col4a6B1AVK5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Col4a6B1AVK5 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Col4a6B1AVK5 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col4a6B1AVK5 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col4a6B1AVK5 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col4a6B1AVK5 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.74■■□□□ 1.07
Col4a6B1AVK5 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.74■■□□□ 1.07
Col4a6B1AVK5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col4a6B1AVK5 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col4a6B1AVK5 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col4a6B1AVK5 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Col4a6B1AVK5 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col4a6B1AVK5 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Col4a6B1AVK5 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col4a6B1AVK5 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col4a6B1AVK5 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Col4a6B1AVK5 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.73■■□□□ 1.07
Col4a6B1AVK5 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Col4a6B1AVK5 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.72■■□□□ 1.07
Col4a6B1AVK5 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col4a6B1AVK5 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col4a6B1AVK5 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Col4a6B1AVK5 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col4a6B1AVK5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Col4a6B1AVK5 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col4a6B1AVK5 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Col4a6B1AVK5 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Col4a6B1AVK5 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Col4a6B1AVK5 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Col4a6B1AVK5 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col4a6B1AVK5 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col4a6B1AVK5 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Col4a6B1AVK5 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Col4a6B1AVK5 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms