Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28729A0A1B0GSW2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm28729A0A1B0GSW2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm28729A0A1B0GSW2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Gm28729A0A1B0GSW2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.35■□□□□ 0.85
Gm28729A0A1B0GSW2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Gm28729A0A1B0GSW2 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Gm28729A0A1B0GSW2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm28729A0A1B0GSW2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm28729A0A1B0GSW2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gm28729A0A1B0GSW2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.34■□□□□ 0.85
Gm28729A0A1B0GSW2 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm28729A0A1B0GSW2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm28729A0A1B0GSW2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gm28729A0A1B0GSW2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Gm28729A0A1B0GSW2 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Gm28729A0A1B0GSW2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.33■□□□□ 0.85
Gm28729A0A1B0GSW2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm28729A0A1B0GSW2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Gm28729A0A1B0GSW2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Gm28729A0A1B0GSW2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm28729A0A1B0GSW2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm28729A0A1B0GSW2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm28729A0A1B0GSW2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm28729A0A1B0GSW2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28729A0A1B0GSW2 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28729A0A1B0GSW2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28729A0A1B0GSW2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Gm28729A0A1B0GSW2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Gm28729A0A1B0GSW2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28729A0A1B0GSW2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28729A0A1B0GSW2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.32■□□□□ 0.84
Gm28729A0A1B0GSW2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28729A0A1B0GSW2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28729A0A1B0GSW2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gm28729A0A1B0GSW2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28729A0A1B0GSW2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28729A0A1B0GSW2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28729A0A1B0GSW2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28729A0A1B0GSW2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28729A0A1B0GSW2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28729A0A1B0GSW2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28729A0A1B0GSW2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28729A0A1B0GSW2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm28729A0A1B0GSW2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Gm28729A0A1B0GSW2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28729A0A1B0GSW2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28729A0A1B0GSW2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28729A0A1B0GSW2 Gm12251-201ENSMUST00000117893 792 ntBASIC20.3■□□□□ 0.84
Gm28729A0A1B0GSW2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.3■□□□□ 0.84
Gm28729A0A1B0GSW2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Gm28729A0A1B0GSW2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28729A0A1B0GSW2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Gm28729A0A1B0GSW2 Gm8493-201ENSMUST00000196881 489 ntBASIC20.3■□□□□ 0.84
Gm28729A0A1B0GSW2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Gm28729A0A1B0GSW2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28729A0A1B0GSW2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28729A0A1B0GSW2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28729A0A1B0GSW2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Gm28729A0A1B0GSW2 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gm28729A0A1B0GSW2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm28729A0A1B0GSW2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.29■□□□□ 0.84
Gm28729A0A1B0GSW2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gm28729A0A1B0GSW2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gm28729A0A1B0GSW2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.29■□□□□ 0.84
Gm28729A0A1B0GSW2 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.29■□□□□ 0.84
Gm28729A0A1B0GSW2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.29■□□□□ 0.84
Gm28729A0A1B0GSW2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm28729A0A1B0GSW2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm28729A0A1B0GSW2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm28729A0A1B0GSW2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm28729A0A1B0GSW2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm28729A0A1B0GSW2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm28729A0A1B0GSW2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm28729A0A1B0GSW2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm28729A0A1B0GSW2 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.28■□□□□ 0.84
Gm28729A0A1B0GSW2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm28729A0A1B0GSW2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm28729A0A1B0GSW2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm28729A0A1B0GSW2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.28■□□□□ 0.84
Gm28729A0A1B0GSW2 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.28■□□□□ 0.84
Gm28729A0A1B0GSW2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Gm28729A0A1B0GSW2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm28729A0A1B0GSW2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm28729A0A1B0GSW2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm28729A0A1B0GSW2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm28729A0A1B0GSW2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm28729A0A1B0GSW2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm28729A0A1B0GSW2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.28■□□□□ 0.84
Gm28729A0A1B0GSW2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gm28729A0A1B0GSW2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Gm28729A0A1B0GSW2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm28729A0A1B0GSW2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm28729A0A1B0GSW2 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.27■□□□□ 0.84
Gm28729A0A1B0GSW2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Gm28729A0A1B0GSW2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm28729A0A1B0GSW2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gm28729A0A1B0GSW2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm28729A0A1B0GSW2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.26■□□□□ 0.83
Gm28729A0A1B0GSW2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms