Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Lnp1A0A1B0GSK3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Lnp1A0A1B0GSK3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.18■□□□□ 0.34
Lnp1A0A1B0GSK3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Lnp1A0A1B0GSK3 Gm10232-201ENSMUST00000089221 720 ntBASIC17.18■□□□□ 0.34
Lnp1A0A1B0GSK3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
Lnp1A0A1B0GSK3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lnp1A0A1B0GSK3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lnp1A0A1B0GSK3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lnp1A0A1B0GSK3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Lnp1A0A1B0GSK3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lnp1A0A1B0GSK3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lnp1A0A1B0GSK3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lnp1A0A1B0GSK3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lnp1A0A1B0GSK3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Lnp1A0A1B0GSK3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lnp1A0A1B0GSK3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lnp1A0A1B0GSK3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lnp1A0A1B0GSK3 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.17■□□□□ 0.34
Lnp1A0A1B0GSK3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lnp1A0A1B0GSK3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Lnp1A0A1B0GSK3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lnp1A0A1B0GSK3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lnp1A0A1B0GSK3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lnp1A0A1B0GSK3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lnp1A0A1B0GSK3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lnp1A0A1B0GSK3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lnp1A0A1B0GSK3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lnp1A0A1B0GSK3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lnp1A0A1B0GSK3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lnp1A0A1B0GSK3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lnp1A0A1B0GSK3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Lnp1A0A1B0GSK3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lnp1A0A1B0GSK3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lnp1A0A1B0GSK3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lnp1A0A1B0GSK3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lnp1A0A1B0GSK3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lnp1A0A1B0GSK3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Lnp1A0A1B0GSK3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Lnp1A0A1B0GSK3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lnp1A0A1B0GSK3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lnp1A0A1B0GSK3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Lnp1A0A1B0GSK3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lnp1A0A1B0GSK3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lnp1A0A1B0GSK3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lnp1A0A1B0GSK3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Lnp1A0A1B0GSK3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lnp1A0A1B0GSK3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lnp1A0A1B0GSK3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.14■□□□□ 0.33
Lnp1A0A1B0GSK3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lnp1A0A1B0GSK3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lnp1A0A1B0GSK3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.14■□□□□ 0.33
Lnp1A0A1B0GSK3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lnp1A0A1B0GSK3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lnp1A0A1B0GSK3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lnp1A0A1B0GSK3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lnp1A0A1B0GSK3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.13■□□□□ 0.33
Lnp1A0A1B0GSK3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.13■□□□□ 0.33
Lnp1A0A1B0GSK3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lnp1A0A1B0GSK3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lnp1A0A1B0GSK3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lnp1A0A1B0GSK3 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.12■□□□□ 0.33
Lnp1A0A1B0GSK3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Lnp1A0A1B0GSK3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lnp1A0A1B0GSK3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lnp1A0A1B0GSK3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lnp1A0A1B0GSK3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.12■□□□□ 0.33
Lnp1A0A1B0GSK3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lnp1A0A1B0GSK3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lnp1A0A1B0GSK3 Gm15820-201ENSMUST00000201566 728 ntBASIC17.12■□□□□ 0.33
Lnp1A0A1B0GSK3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Lnp1A0A1B0GSK3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lnp1A0A1B0GSK3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Lnp1A0A1B0GSK3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lnp1A0A1B0GSK3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.12■□□□□ 0.33
Lnp1A0A1B0GSK3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lnp1A0A1B0GSK3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
Lnp1A0A1B0GSK3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Lnp1A0A1B0GSK3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lnp1A0A1B0GSK3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Lnp1A0A1B0GSK3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lnp1A0A1B0GSK3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.11■□□□□ 0.33
Lnp1A0A1B0GSK3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.11■□□□□ 0.33
Lnp1A0A1B0GSK3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lnp1A0A1B0GSK3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lnp1A0A1B0GSK3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lnp1A0A1B0GSK3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lnp1A0A1B0GSK3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lnp1A0A1B0GSK3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lnp1A0A1B0GSK3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lnp1A0A1B0GSK3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lnp1A0A1B0GSK3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.1■□□□□ 0.33
Lnp1A0A1B0GSK3 Gm5812-201ENSMUST00000061073 957 ntBASIC17.1■□□□□ 0.33
Lnp1A0A1B0GSK3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lnp1A0A1B0GSK3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Lnp1A0A1B0GSK3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lnp1A0A1B0GSK3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lnp1A0A1B0GSK3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lnp1A0A1B0GSK3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lnp1A0A1B0GSK3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms