Protein–RNA interactions for Protein: A0A1B0GSD2

Slc6a21, Transporter, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a21A0A1B0GSD2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Slc6a21A0A1B0GSD2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Slc6a21A0A1B0GSD2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Slc6a21A0A1B0GSD2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Slc6a21A0A1B0GSD2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Slc6a21A0A1B0GSD2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Slc6a21A0A1B0GSD2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC22.69■■□□□ 1.22
Slc6a21A0A1B0GSD2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Slc6a21A0A1B0GSD2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Slc6a21A0A1B0GSD2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC22.68■■□□□ 1.22
Slc6a21A0A1B0GSD2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC22.68■■□□□ 1.22
Slc6a21A0A1B0GSD2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Slc6a21A0A1B0GSD2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Slc6a21A0A1B0GSD2 AC164629.5-201ENSMUST00000220387 632 ntBASIC22.68■■□□□ 1.22
Slc6a21A0A1B0GSD2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Slc6a21A0A1B0GSD2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Slc6a21A0A1B0GSD2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Slc6a21A0A1B0GSD2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Slc6a21A0A1B0GSD2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Slc6a21A0A1B0GSD2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Slc6a21A0A1B0GSD2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Slc6a21A0A1B0GSD2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Slc6a21A0A1B0GSD2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Slc6a21A0A1B0GSD2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Slc6a21A0A1B0GSD2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Slc6a21A0A1B0GSD2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Slc6a21A0A1B0GSD2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Slc6a21A0A1B0GSD2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
Slc6a21A0A1B0GSD2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
Slc6a21A0A1B0GSD2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Slc6a21A0A1B0GSD2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC22.66■■□□□ 1.22
Slc6a21A0A1B0GSD2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC22.66■■□□□ 1.22
Slc6a21A0A1B0GSD2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Slc6a21A0A1B0GSD2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Slc6a21A0A1B0GSD2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Slc6a21A0A1B0GSD2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Slc6a21A0A1B0GSD2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Slc6a21A0A1B0GSD2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Slc6a21A0A1B0GSD2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Slc6a21A0A1B0GSD2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Slc6a21A0A1B0GSD2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Slc6a21A0A1B0GSD2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Slc6a21A0A1B0GSD2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Slc6a21A0A1B0GSD2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC22.65■■□□□ 1.22
Slc6a21A0A1B0GSD2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC22.64■■□□□ 1.22
Slc6a21A0A1B0GSD2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Slc6a21A0A1B0GSD2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Slc6a21A0A1B0GSD2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Slc6a21A0A1B0GSD2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC22.64■■□□□ 1.21
Slc6a21A0A1B0GSD2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Slc6a21A0A1B0GSD2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Slc6a21A0A1B0GSD2 Gm7160-202ENSMUST00000188519 1027 ntBASIC22.63■■□□□ 1.21
Slc6a21A0A1B0GSD2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Slc6a21A0A1B0GSD2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Slc6a21A0A1B0GSD2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Slc6a21A0A1B0GSD2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Slc6a21A0A1B0GSD2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Slc6a21A0A1B0GSD2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Slc6a21A0A1B0GSD2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Slc6a21A0A1B0GSD2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Slc6a21A0A1B0GSD2 Gm6085-201ENSMUST00000182774 1470 ntBASIC22.62■■□□□ 1.21
Slc6a21A0A1B0GSD2 Gm29257-201ENSMUST00000186115 639 ntBASIC22.62■■□□□ 1.21
Slc6a21A0A1B0GSD2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Slc6a21A0A1B0GSD2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Slc6a21A0A1B0GSD2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Slc6a21A0A1B0GSD2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC22.61■■□□□ 1.21
Slc6a21A0A1B0GSD2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC22.61■■□□□ 1.21
Slc6a21A0A1B0GSD2 Gm43530-201ENSMUST00000195920 274 ntBASIC22.61■■□□□ 1.21
Slc6a21A0A1B0GSD2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Slc6a21A0A1B0GSD2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Slc6a21A0A1B0GSD2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Slc6a21A0A1B0GSD2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Slc6a21A0A1B0GSD2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Slc6a21A0A1B0GSD2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Slc6a21A0A1B0GSD2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Slc6a21A0A1B0GSD2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC22.6■■□□□ 1.21
Slc6a21A0A1B0GSD2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
Slc6a21A0A1B0GSD2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC22.6■■□□□ 1.21
Slc6a21A0A1B0GSD2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Slc6a21A0A1B0GSD2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Slc6a21A0A1B0GSD2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Slc6a21A0A1B0GSD2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Slc6a21A0A1B0GSD2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Slc6a21A0A1B0GSD2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Slc6a21A0A1B0GSD2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Slc6a21A0A1B0GSD2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Slc6a21A0A1B0GSD2 Spcs1-204ENSMUST00000226782 949 ntBASIC22.59■■□□□ 1.21
Slc6a21A0A1B0GSD2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Slc6a21A0A1B0GSD2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Slc6a21A0A1B0GSD2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Slc6a21A0A1B0GSD2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Slc6a21A0A1B0GSD2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Slc6a21A0A1B0GSD2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC22.58■■□□□ 1.21
Slc6a21A0A1B0GSD2 Gm26833-201ENSMUST00000180899 440 ntBASIC22.58■■□□□ 1.21
Slc6a21A0A1B0GSD2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC22.58■■□□□ 1.21
Slc6a21A0A1B0GSD2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC22.58■■□□□ 1.21
Slc6a21A0A1B0GSD2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Slc6a21A0A1B0GSD2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Slc6a21A0A1B0GSD2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Slc6a21A0A1B0GSD2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms