Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcna-ps2A0A140T8V5 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcna-ps2A0A140T8V5 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcna-ps2A0A140T8V5 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
Pcna-ps2A0A140T8V5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcna-ps2A0A140T8V5 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Pcna-ps2A0A140T8V5 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcna-ps2A0A140T8V5 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcna-ps2A0A140T8V5 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcna-ps2A0A140T8V5 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.67■□□□□ 0.9
Pcna-ps2A0A140T8V5 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.67■□□□□ 0.9
Pcna-ps2A0A140T8V5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.67■□□□□ 0.9
Pcna-ps2A0A140T8V5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Pcna-ps2A0A140T8V5 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Pcna-ps2A0A140T8V5 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.67■□□□□ 0.9
Pcna-ps2A0A140T8V5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcna-ps2A0A140T8V5 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.66■□□□□ 0.9
Pcna-ps2A0A140T8V5 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcna-ps2A0A140T8V5 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcna-ps2A0A140T8V5 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcna-ps2A0A140T8V5 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Pcna-ps2A0A140T8V5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.66■□□□□ 0.9
Pcna-ps2A0A140T8V5 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Pcna-ps2A0A140T8V5 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcna-ps2A0A140T8V5 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcna-ps2A0A140T8V5 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.66■□□□□ 0.9
Pcna-ps2A0A140T8V5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcna-ps2A0A140T8V5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Pcna-ps2A0A140T8V5 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcna-ps2A0A140T8V5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcna-ps2A0A140T8V5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcna-ps2A0A140T8V5 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcna-ps2A0A140T8V5 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcna-ps2A0A140T8V5 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcna-ps2A0A140T8V5 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcna-ps2A0A140T8V5 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcna-ps2A0A140T8V5 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcna-ps2A0A140T8V5 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
Pcna-ps2A0A140T8V5 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcna-ps2A0A140T8V5 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcna-ps2A0A140T8V5 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcna-ps2A0A140T8V5 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcna-ps2A0A140T8V5 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcna-ps2A0A140T8V5 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Pcna-ps2A0A140T8V5 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcna-ps2A0A140T8V5 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.64■□□□□ 0.89
Pcna-ps2A0A140T8V5 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Pcna-ps2A0A140T8V5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.64■□□□□ 0.89
Pcna-ps2A0A140T8V5 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.64■□□□□ 0.89
Pcna-ps2A0A140T8V5 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.64■□□□□ 0.89
Pcna-ps2A0A140T8V5 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcna-ps2A0A140T8V5 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcna-ps2A0A140T8V5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcna-ps2A0A140T8V5 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Pcna-ps2A0A140T8V5 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcna-ps2A0A140T8V5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcna-ps2A0A140T8V5 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcna-ps2A0A140T8V5 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcna-ps2A0A140T8V5 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcna-ps2A0A140T8V5 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcna-ps2A0A140T8V5 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcna-ps2A0A140T8V5 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Pcna-ps2A0A140T8V5 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcna-ps2A0A140T8V5 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcna-ps2A0A140T8V5 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcna-ps2A0A140T8V5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcna-ps2A0A140T8V5 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcna-ps2A0A140T8V5 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcna-ps2A0A140T8V5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcna-ps2A0A140T8V5 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcna-ps2A0A140T8V5 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Pcna-ps2A0A140T8V5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcna-ps2A0A140T8V5 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Pcna-ps2A0A140T8V5 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcna-ps2A0A140T8V5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcna-ps2A0A140T8V5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Pcna-ps2A0A140T8V5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Pcna-ps2A0A140T8V5 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcna-ps2A0A140T8V5 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcna-ps2A0A140T8V5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.6■□□□□ 0.89
Pcna-ps2A0A140T8V5 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.6■□□□□ 0.89
Pcna-ps2A0A140T8V5 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.6■□□□□ 0.89
Pcna-ps2A0A140T8V5 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcna-ps2A0A140T8V5 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcna-ps2A0A140T8V5 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Pcna-ps2A0A140T8V5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Pcna-ps2A0A140T8V5 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Pcna-ps2A0A140T8V5 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Pcna-ps2A0A140T8V5 Gm15820-201ENSMUST00000201566 728 ntBASIC20.59■□□□□ 0.89
Pcna-ps2A0A140T8V5 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcna-ps2A0A140T8V5 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcna-ps2A0A140T8V5 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcna-ps2A0A140T8V5 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcna-ps2A0A140T8V5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Pcna-ps2A0A140T8V5 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcna-ps2A0A140T8V5 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Pcna-ps2A0A140T8V5 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.58■□□□□ 0.89
Pcna-ps2A0A140T8V5 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Pcna-ps2A0A140T8V5 Gm10232-201ENSMUST00000089221 720 ntBASIC20.58■□□□□ 0.89
Pcna-ps2A0A140T8V5 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms