Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc194A0A140LIT1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc194A0A140LIT1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc194A0A140LIT1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc194A0A140LIT1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc194A0A140LIT1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ccdc194A0A140LIT1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc194A0A140LIT1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc194A0A140LIT1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.51■□□□□ 0.87
Ccdc194A0A140LIT1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc194A0A140LIT1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc194A0A140LIT1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc194A0A140LIT1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc194A0A140LIT1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ccdc194A0A140LIT1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc194A0A140LIT1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ccdc194A0A140LIT1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc194A0A140LIT1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.5■□□□□ 0.87
Ccdc194A0A140LIT1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc194A0A140LIT1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc194A0A140LIT1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc194A0A140LIT1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc194A0A140LIT1 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.5■□□□□ 0.87
Ccdc194A0A140LIT1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc194A0A140LIT1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc194A0A140LIT1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc194A0A140LIT1 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Ccdc194A0A140LIT1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Ccdc194A0A140LIT1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc194A0A140LIT1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc194A0A140LIT1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Ccdc194A0A140LIT1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc194A0A140LIT1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc194A0A140LIT1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc194A0A140LIT1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc194A0A140LIT1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ccdc194A0A140LIT1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc194A0A140LIT1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc194A0A140LIT1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc194A0A140LIT1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc194A0A140LIT1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc194A0A140LIT1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc194A0A140LIT1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc194A0A140LIT1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc194A0A140LIT1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc194A0A140LIT1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc194A0A140LIT1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc194A0A140LIT1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Ccdc194A0A140LIT1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc194A0A140LIT1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc194A0A140LIT1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Ccdc194A0A140LIT1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Ccdc194A0A140LIT1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc194A0A140LIT1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.46■□□□□ 0.87
Ccdc194A0A140LIT1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc194A0A140LIT1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Ccdc194A0A140LIT1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc194A0A140LIT1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc194A0A140LIT1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Ccdc194A0A140LIT1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ccdc194A0A140LIT1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.45■□□□□ 0.86
Ccdc194A0A140LIT1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc194A0A140LIT1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Ccdc194A0A140LIT1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.45■□□□□ 0.86
Ccdc194A0A140LIT1 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.45■□□□□ 0.86
Ccdc194A0A140LIT1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc194A0A140LIT1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.45■□□□□ 0.86
Ccdc194A0A140LIT1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc194A0A140LIT1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc194A0A140LIT1 Cap2-205ENSMUST00000225824 1634 ntBASIC20.45■□□□□ 0.86
Ccdc194A0A140LIT1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc194A0A140LIT1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc194A0A140LIT1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc194A0A140LIT1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.44■□□□□ 0.86
Ccdc194A0A140LIT1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc194A0A140LIT1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc194A0A140LIT1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc194A0A140LIT1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc194A0A140LIT1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc194A0A140LIT1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc194A0A140LIT1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc194A0A140LIT1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc194A0A140LIT1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc194A0A140LIT1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc194A0A140LIT1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc194A0A140LIT1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc194A0A140LIT1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc194A0A140LIT1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc194A0A140LIT1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Ccdc194A0A140LIT1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.42■□□□□ 0.86
Ccdc194A0A140LIT1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.42■□□□□ 0.86
Ccdc194A0A140LIT1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc194A0A140LIT1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc194A0A140LIT1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc194A0A140LIT1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc194A0A140LIT1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc194A0A140LIT1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc194A0A140LIT1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc194A0A140LIT1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.41■□□□□ 0.86
Ccdc194A0A140LIT1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms