Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC14.15□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13d-4A0A0G2JFX3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Notumos-201ENSMUST00000151998 2659 ntBASIC14.14□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-4A0A0G2JFX3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC14.14□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trav13d-4A0A0G2JFX3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC14.12□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.12□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-4A0A0G2JFX3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-4A0A0G2JFX3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav13d-4A0A0G2JFX3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.11□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-4A0A0G2JFX3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav13d-4A0A0G2JFX3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC14.1□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC14.09□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav13d-4A0A0G2JFX3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC14.08□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-4A0A0G2JFX3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Nsd1-206ENSMUST00000224918 1001 ntBASIC14.08□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-4A0A0G2JFX3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-4A0A0G2JFX3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms