Protein–RNA interactions for Protein: A0A0G2JDF5

Trav14n-2, T cell receptor alpha variable 14D-2 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-2A0A0G2JDF5 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.1■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.09■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav14n-2A0A0G2JDF5 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav14n-2A0A0G2JDF5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav14n-2A0A0G2JDF5 Gm12818-201ENSMUST00000117562 1349 ntBASIC15.08■□□□□ 0
Trav14n-2A0A0G2JDF5 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav14n-2A0A0G2JDF5 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Trav14n-2A0A0G2JDF5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav14n-2A0A0G2JDF5 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.08■□□□□ 0
Trav14n-2A0A0G2JDF5 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav14n-2A0A0G2JDF5 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14n-2A0A0G2JDF5 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14n-2A0A0G2JDF5 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.07■□□□□ 0
Trav14n-2A0A0G2JDF5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Trav14n-2A0A0G2JDF5 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14n-2A0A0G2JDF5 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav14n-2A0A0G2JDF5 Gm5131-201ENSMUST00000212776 1238 ntBASIC15.07■□□□□ 0
Trav14n-2A0A0G2JDF5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC15.07■□□□□ 0
Trav14n-2A0A0G2JDF5 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav14n-2A0A0G2JDF5 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14n-2A0A0G2JDF5 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14n-2A0A0G2JDF5 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav14n-2A0A0G2JDF5 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14n-2A0A0G2JDF5 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14n-2A0A0G2JDF5 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav14n-2A0A0G2JDF5 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav14n-2A0A0G2JDF5 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav14n-2A0A0G2JDF5 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav14n-2A0A0G2JDF5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Trav14n-2A0A0G2JDF5 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav14n-2A0A0G2JDF5 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav14n-2A0A0G2JDF5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav14n-2A0A0G2JDF5 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav14n-2A0A0G2JDF5 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Trav14n-2A0A0G2JDF5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav14n-2A0A0G2JDF5 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.05■□□□□ 0
Trav14n-2A0A0G2JDF5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC15.05■□□□□ -0
Trav14n-2A0A0G2JDF5 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav14n-2A0A0G2JDF5 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trav14n-2A0A0G2JDF5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.05■□□□□ -0
Trav14n-2A0A0G2JDF5 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav14n-2A0A0G2JDF5 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav14n-2A0A0G2JDF5 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav14n-2A0A0G2JDF5 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav14n-2A0A0G2JDF5 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav14n-2A0A0G2JDF5 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.04■□□□□ -0
Trav14n-2A0A0G2JDF5 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav14n-2A0A0G2JDF5 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav14n-2A0A0G2JDF5 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.04■□□□□ -0
Trav14n-2A0A0G2JDF5 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav14n-2A0A0G2JDF5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC15.04■□□□□ -0
Trav14n-2A0A0G2JDF5 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC15.04■□□□□ -0
Trav14n-2A0A0G2JDF5 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav14n-2A0A0G2JDF5 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav14n-2A0A0G2JDF5 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav14n-2A0A0G2JDF5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav14n-2A0A0G2JDF5 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav14n-2A0A0G2JDF5 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav14n-2A0A0G2JDF5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav14n-2A0A0G2JDF5 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav14n-2A0A0G2JDF5 Mir3960-201ENSMUST00000198213 73 ntBASIC15.03■□□□□ -0
Trav14n-2A0A0G2JDF5 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav14n-2A0A0G2JDF5 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav14n-2A0A0G2JDF5 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.03■□□□□ -0
Trav14n-2A0A0G2JDF5 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav14n-2A0A0G2JDF5 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms