Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav11A0A0B4J1J9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav11A0A0B4J1J9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav11A0A0B4J1J9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav11A0A0B4J1J9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav11A0A0B4J1J9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav11A0A0B4J1J9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav11A0A0B4J1J9 Gm4430-201ENSMUST00000192413 1943 ntBASIC14.13□□□□□ -0.15
Trav11A0A0B4J1J9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav11A0A0B4J1J9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav11A0A0B4J1J9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC14.13□□□□□ -0.15
Trav11A0A0B4J1J9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav11A0A0B4J1J9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav11A0A0B4J1J9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Trav11A0A0B4J1J9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav11A0A0B4J1J9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav11A0A0B4J1J9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav11A0A0B4J1J9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav11A0A0B4J1J9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav11A0A0B4J1J9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav11A0A0B4J1J9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav11A0A0B4J1J9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav11A0A0B4J1J9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav11A0A0B4J1J9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav11A0A0B4J1J9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav11A0A0B4J1J9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav11A0A0B4J1J9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav11A0A0B4J1J9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav11A0A0B4J1J9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav11A0A0B4J1J9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Trav11A0A0B4J1J9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav11A0A0B4J1J9 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.12□□□□□ -0.15
Trav11A0A0B4J1J9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav11A0A0B4J1J9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav11A0A0B4J1J9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav11A0A0B4J1J9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav11A0A0B4J1J9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav11A0A0B4J1J9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav11A0A0B4J1J9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav11A0A0B4J1J9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav11A0A0B4J1J9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav11A0A0B4J1J9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav11A0A0B4J1J9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav11A0A0B4J1J9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav11A0A0B4J1J9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trav11A0A0B4J1J9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC14.1□□□□□ -0.15
Trav11A0A0B4J1J9 Gm16437-201ENSMUST00000025669 507 ntBASIC14.1□□□□□ -0.15
Trav11A0A0B4J1J9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav11A0A0B4J1J9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav11A0A0B4J1J9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Trav11A0A0B4J1J9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav11A0A0B4J1J9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav11A0A0B4J1J9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav11A0A0B4J1J9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav11A0A0B4J1J9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav11A0A0B4J1J9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav11A0A0B4J1J9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav11A0A0B4J1J9 Snhg20-203ENSMUST00000182811 2153 ntBASIC14.09□□□□□ -0.15
Trav11A0A0B4J1J9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav11A0A0B4J1J9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav11A0A0B4J1J9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav11A0A0B4J1J9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC14.09□□□□□ -0.15
Trav11A0A0B4J1J9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav11A0A0B4J1J9 Scarna2-201ENSMUST00000157560 414 ntBASIC14.09□□□□□ -0.15
Trav11A0A0B4J1J9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav11A0A0B4J1J9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav11A0A0B4J1J9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav11A0A0B4J1J9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav11A0A0B4J1J9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav11A0A0B4J1J9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav11A0A0B4J1J9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trav11A0A0B4J1J9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav11A0A0B4J1J9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav11A0A0B4J1J9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav11A0A0B4J1J9 Gm9806-201ENSMUST00000051080 552 ntBASIC14.08□□□□□ -0.16
Trav11A0A0B4J1J9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav11A0A0B4J1J9 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav11A0A0B4J1J9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav11A0A0B4J1J9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav11A0A0B4J1J9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav11A0A0B4J1J9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav11A0A0B4J1J9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav11A0A0B4J1J9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC14.07□□□□□ -0.16
Trav11A0A0B4J1J9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC14.07□□□□□ -0.16
Trav11A0A0B4J1J9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav11A0A0B4J1J9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav11A0A0B4J1J9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav11A0A0B4J1J9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav11A0A0B4J1J9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav11A0A0B4J1J9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav11A0A0B4J1J9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav11A0A0B4J1J9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Trav11A0A0B4J1J9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav11A0A0B4J1J9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC14.06□□□□□ -0.16
Trav11A0A0B4J1J9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC14.06□□□□□ -0.16
Trav11A0A0B4J1J9 Gm5987-201ENSMUST00000196433 1151 ntBASIC14.06□□□□□ -0.16
Trav11A0A0B4J1J9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav11A0A0B4J1J9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav11A0A0B4J1J9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trav11A0A0B4J1J9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms