Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sirpb1aA0A0A6YYP6 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.54■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sirpb1aA0A0A6YYP6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.51■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.51■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Cap2-205ENSMUST00000225824 1634 ntBASIC19.51■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.5■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.5■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.49■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.48■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.48■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.47■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sirpb1aA0A0A6YYP6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.47■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sirpb1aA0A0A6YYP6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sirpb1aA0A0A6YYP6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.45■□□□□ 0.7
Sirpb1aA0A0A6YYP6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.45■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sirpb1aA0A0A6YYP6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sirpb1aA0A0A6YYP6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms