Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh7A0A0A6YY83 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh7A0A0A6YY83 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.38■■□□□ 1.01
Pcdh7A0A0A6YY83 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh7A0A0A6YY83 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Pcdh7A0A0A6YY83 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Pcdh7A0A0A6YY83 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.37■■□□□ 1.01
Pcdh7A0A0A6YY83 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh7A0A0A6YY83 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh7A0A0A6YY83 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh7A0A0A6YY83 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh7A0A0A6YY83 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh7A0A0A6YY83 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh7A0A0A6YY83 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Pcdh7A0A0A6YY83 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh7A0A0A6YY83 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh7A0A0A6YY83 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.37■■□□□ 1.01
Pcdh7A0A0A6YY83 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Pcdh7A0A0A6YY83 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh7A0A0A6YY83 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.36■■□□□ 1.01
Pcdh7A0A0A6YY83 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.36■■□□□ 1.01
Pcdh7A0A0A6YY83 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh7A0A0A6YY83 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh7A0A0A6YY83 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Pcdh7A0A0A6YY83 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh7A0A0A6YY83 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Pcdh7A0A0A6YY83 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.35■■□□□ 1.01
Pcdh7A0A0A6YY83 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh7A0A0A6YY83 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.35■■□□□ 1.01
Pcdh7A0A0A6YY83 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.35■■□□□ 1.01
Pcdh7A0A0A6YY83 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh7A0A0A6YY83 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.34■■□□□ 1.01
Pcdh7A0A0A6YY83 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh7A0A0A6YY83 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh7A0A0A6YY83 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Pcdh7A0A0A6YY83 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh7A0A0A6YY83 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.33■■□□□ 1.01
Pcdh7A0A0A6YY83 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdh7A0A0A6YY83 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdh7A0A0A6YY83 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdh7A0A0A6YY83 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdh7A0A0A6YY83 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.32■■□□□ 1
Pcdh7A0A0A6YY83 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdh7A0A0A6YY83 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdh7A0A0A6YY83 Gm7417-201ENSMUST00000192950 473 ntBASIC21.31■■□□□ 1
Pcdh7A0A0A6YY83 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdh7A0A0A6YY83 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdh7A0A0A6YY83 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdh7A0A0A6YY83 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdh7A0A0A6YY83 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdh7A0A0A6YY83 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdh7A0A0A6YY83 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdh7A0A0A6YY83 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdh7A0A0A6YY83 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.29■■□□□ 1
Pcdh7A0A0A6YY83 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.29■■□□□ 1
Pcdh7A0A0A6YY83 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdh7A0A0A6YY83 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdh7A0A0A6YY83 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdh7A0A0A6YY83 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdh7A0A0A6YY83 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdh7A0A0A6YY83 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdh7A0A0A6YY83 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.28■■□□□ 1
Pcdh7A0A0A6YY83 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdh7A0A0A6YY83 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Pcdh7A0A0A6YY83 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdh7A0A0A6YY83 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.28■■□□□ 1
Pcdh7A0A0A6YY83 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdh7A0A0A6YY83 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdh7A0A0A6YY83 Etf1-202ENSMUST00000180351 108 ntBASIC21.27■■□□□ 1
Pcdh7A0A0A6YY83 Gm9959-201ENSMUST00000068277 390 ntBASIC21.27■■□□□ 1
Pcdh7A0A0A6YY83 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdh7A0A0A6YY83 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdh7A0A0A6YY83 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdh7A0A0A6YY83 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdh7A0A0A6YY83 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdh7A0A0A6YY83 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pcdh7A0A0A6YY83 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Pcdh7A0A0A6YY83 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh7A0A0A6YY83 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh7A0A0A6YY83 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh7A0A0A6YY83 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh7A0A0A6YY83 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh7A0A0A6YY83 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh7A0A0A6YY83 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh7A0A0A6YY83 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.26■□□□□ 0.99
Pcdh7A0A0A6YY83 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.26■□□□□ 0.99
Pcdh7A0A0A6YY83 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh7A0A0A6YY83 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Pcdh7A0A0A6YY83 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh7A0A0A6YY83 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh7A0A0A6YY83 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh7A0A0A6YY83 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh7A0A0A6YY83 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdh7A0A0A6YY83 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Pcdh7A0A0A6YY83 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdh7A0A0A6YY83 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdh7A0A0A6YY83 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdh7A0A0A6YY83 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdh7A0A0A6YY83 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.25■□□□□ 0.99
Pcdh7A0A0A6YY83 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms