Protein–RNA interactions for Protein: A0A0A6YX19

Ighv6-4, Immunoglobulin heavy variable V6-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv6-4A0A0A6YX19 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16.34■□□□□ 0.21
Ighv6-4A0A0A6YX19 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv6-4A0A0A6YX19 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv6-4A0A0A6YX19 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.34■□□□□ 0.21
Ighv6-4A0A0A6YX19 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ighv6-4A0A0A6YX19 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv6-4A0A0A6YX19 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv6-4A0A0A6YX19 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Ighv6-4A0A0A6YX19 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Ighv6-4A0A0A6YX19 Gm9939-201ENSMUST00000067161 1154 ntBASIC16.33■□□□□ 0.2
Ighv6-4A0A0A6YX19 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv6-4A0A0A6YX19 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv6-4A0A0A6YX19 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv6-4A0A0A6YX19 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv6-4A0A0A6YX19 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv6-4A0A0A6YX19 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv6-4A0A0A6YX19 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv6-4A0A0A6YX19 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Ighv6-4A0A0A6YX19 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ighv6-4A0A0A6YX19 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.33■□□□□ 0.2
Ighv6-4A0A0A6YX19 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv6-4A0A0A6YX19 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv6-4A0A0A6YX19 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv6-4A0A0A6YX19 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC16.32■□□□□ 0.2
Ighv6-4A0A0A6YX19 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv6-4A0A0A6YX19 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Ighv6-4A0A0A6YX19 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Ighv6-4A0A0A6YX19 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ighv6-4A0A0A6YX19 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv6-4A0A0A6YX19 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv6-4A0A0A6YX19 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv6-4A0A0A6YX19 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv6-4A0A0A6YX19 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv6-4A0A0A6YX19 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv6-4A0A0A6YX19 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv6-4A0A0A6YX19 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ighv6-4A0A0A6YX19 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv6-4A0A0A6YX19 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv6-4A0A0A6YX19 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv6-4A0A0A6YX19 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv6-4A0A0A6YX19 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv6-4A0A0A6YX19 Gm6821-201ENSMUST00000107540 542 ntBASIC16.31■□□□□ 0.2
Ighv6-4A0A0A6YX19 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC16.31■□□□□ 0.2
Ighv6-4A0A0A6YX19 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv6-4A0A0A6YX19 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv6-4A0A0A6YX19 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv6-4A0A0A6YX19 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv6-4A0A0A6YX19 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv6-4A0A0A6YX19 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ighv6-4A0A0A6YX19 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv6-4A0A0A6YX19 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv6-4A0A0A6YX19 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv6-4A0A0A6YX19 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv6-4A0A0A6YX19 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv6-4A0A0A6YX19 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv6-4A0A0A6YX19 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.3■□□□□ 0.2
Ighv6-4A0A0A6YX19 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv6-4A0A0A6YX19 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ighv6-4A0A0A6YX19 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.3■□□□□ 0.2
Ighv6-4A0A0A6YX19 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv6-4A0A0A6YX19 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ighv6-4A0A0A6YX19 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ighv6-4A0A0A6YX19 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv6-4A0A0A6YX19 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.29■□□□□ 0.2
Ighv6-4A0A0A6YX19 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv6-4A0A0A6YX19 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv6-4A0A0A6YX19 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.29■□□□□ 0.2
Ighv6-4A0A0A6YX19 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv6-4A0A0A6YX19 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv6-4A0A0A6YX19 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv6-4A0A0A6YX19 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv6-4A0A0A6YX19 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv6-4A0A0A6YX19 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC16.29■□□□□ 0.2
Ighv6-4A0A0A6YX19 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.29■□□□□ 0.2
Ighv6-4A0A0A6YX19 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv6-4A0A0A6YX19 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv6-4A0A0A6YX19 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.29■□□□□ 0.2
Ighv6-4A0A0A6YX19 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv6-4A0A0A6YX19 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv6-4A0A0A6YX19 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv6-4A0A0A6YX19 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv6-4A0A0A6YX19 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv6-4A0A0A6YX19 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Ighv6-4A0A0A6YX19 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.28■□□□□ 0.2
Ighv6-4A0A0A6YX19 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv6-4A0A0A6YX19 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv6-4A0A0A6YX19 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv6-4A0A0A6YX19 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv6-4A0A0A6YX19 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv6-4A0A0A6YX19 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv6-4A0A0A6YX19 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv6-4A0A0A6YX19 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv6-4A0A0A6YX19 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv6-4A0A0A6YX19 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv6-4A0A0A6YX19 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Ighv6-4A0A0A6YX19 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv6-4A0A0A6YX19 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ighv6-4A0A0A6YX19 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Ighv6-4A0A0A6YX19 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv6-4A0A0A6YX19 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms