Protein–RNA interactions for Protein: A0A087WQQ0

Gm28557, Predicted gene 28557, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28557A0A087WQQ0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Gm28557A0A087WQQ0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm28557A0A087WQQ0 Gm27502-201ENSMUST00000183495 199 ntBASIC18.59■□□□□ 0.57
Gm28557A0A087WQQ0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm28557A0A087WQQ0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm28557A0A087WQQ0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.59■□□□□ 0.57
Gm28557A0A087WQQ0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm28557A0A087WQQ0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Gm28557A0A087WQQ0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm28557A0A087WQQ0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm28557A0A087WQQ0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.58■□□□□ 0.56
Gm28557A0A087WQQ0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm28557A0A087WQQ0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm28557A0A087WQQ0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm28557A0A087WQQ0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm28557A0A087WQQ0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm28557A0A087WQQ0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Gm28557A0A087WQQ0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm28557A0A087WQQ0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm28557A0A087WQQ0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28557A0A087WQQ0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28557A0A087WQQ0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Gm28557A0A087WQQ0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Gm28557A0A087WQQ0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Gm28557A0A087WQQ0 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28557A0A087WQQ0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm28557A0A087WQQ0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Gm28557A0A087WQQ0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Gm28557A0A087WQQ0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28557A0A087WQQ0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28557A0A087WQQ0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28557A0A087WQQ0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28557A0A087WQQ0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28557A0A087WQQ0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28557A0A087WQQ0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.56■□□□□ 0.56
Gm28557A0A087WQQ0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28557A0A087WQQ0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.56■□□□□ 0.56
Gm28557A0A087WQQ0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Gm28557A0A087WQQ0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28557A0A087WQQ0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28557A0A087WQQ0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm28557A0A087WQQ0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.55■□□□□ 0.56
Gm28557A0A087WQQ0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm28557A0A087WQQ0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Gm28557A0A087WQQ0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.55■□□□□ 0.56
Gm28557A0A087WQQ0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm28557A0A087WQQ0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Gm28557A0A087WQQ0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Gm28557A0A087WQQ0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.55■□□□□ 0.56
Gm28557A0A087WQQ0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm28557A0A087WQQ0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm28557A0A087WQQ0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm28557A0A087WQQ0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.54■□□□□ 0.56
Gm28557A0A087WQQ0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gm28557A0A087WQQ0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm28557A0A087WQQ0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Gm28557A0A087WQQ0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm28557A0A087WQQ0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm28557A0A087WQQ0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm28557A0A087WQQ0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Gm28557A0A087WQQ0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm28557A0A087WQQ0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm28557A0A087WQQ0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm28557A0A087WQQ0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm28557A0A087WQQ0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Gm28557A0A087WQQ0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm28557A0A087WQQ0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm28557A0A087WQQ0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm28557A0A087WQQ0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm28557A0A087WQQ0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm28557A0A087WQQ0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.52■□□□□ 0.56
Gm28557A0A087WQQ0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm28557A0A087WQQ0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm28557A0A087WQQ0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.52■□□□□ 0.55
Gm28557A0A087WQQ0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gm28557A0A087WQQ0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Gm28557A0A087WQQ0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Gm28557A0A087WQQ0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm28557A0A087WQQ0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm28557A0A087WQQ0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm28557A0A087WQQ0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm28557A0A087WQQ0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Gm28557A0A087WQQ0 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.51■□□□□ 0.55
Gm28557A0A087WQQ0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.51■□□□□ 0.55
Gm28557A0A087WQQ0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.51■□□□□ 0.55
Gm28557A0A087WQQ0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm28557A0A087WQQ0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm28557A0A087WQQ0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm28557A0A087WQQ0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm28557A0A087WQQ0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm28557A0A087WQQ0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm28557A0A087WQQ0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm28557A0A087WQQ0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm28557A0A087WQQ0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm28557A0A087WQQ0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm28557A0A087WQQ0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.5■□□□□ 0.55
Gm28557A0A087WQQ0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm28557A0A087WQQ0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm28557A0A087WQQ0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm28557A0A087WQQ0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms