Protein–RNA interactions for Protein: A0A087WPN2

Gm3604, Predicted gene 3604, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3604A0A087WPN2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gm3604A0A087WPN2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gm3604A0A087WPN2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm3604A0A087WPN2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm3604A0A087WPN2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gm3604A0A087WPN2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm3604A0A087WPN2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.8■□□□□ 0.92
Gm3604A0A087WPN2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm3604A0A087WPN2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gm3604A0A087WPN2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.8■□□□□ 0.92
Gm3604A0A087WPN2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gm3604A0A087WPN2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm3604A0A087WPN2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Gm3604A0A087WPN2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3604A0A087WPN2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3604A0A087WPN2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3604A0A087WPN2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3604A0A087WPN2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3604A0A087WPN2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3604A0A087WPN2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3604A0A087WPN2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3604A0A087WPN2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3604A0A087WPN2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3604A0A087WPN2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3604A0A087WPN2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3604A0A087WPN2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3604A0A087WPN2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3604A0A087WPN2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3604A0A087WPN2 Gm15039-201ENSMUST00000118914 875 ntBASIC20.77■□□□□ 0.92
Gm3604A0A087WPN2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Gm3604A0A087WPN2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm3604A0A087WPN2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Gm3604A0A087WPN2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.76■□□□□ 0.91
Gm3604A0A087WPN2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3604A0A087WPN2 Gm9847-201ENSMUST00000052528 599 ntBASIC20.76■□□□□ 0.91
Gm3604A0A087WPN2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3604A0A087WPN2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.76■□□□□ 0.91
Gm3604A0A087WPN2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3604A0A087WPN2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3604A0A087WPN2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3604A0A087WPN2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3604A0A087WPN2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3604A0A087WPN2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.75■□□□□ 0.91
Gm3604A0A087WPN2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3604A0A087WPN2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3604A0A087WPN2 Gm13241-201ENSMUST00000094493 780 ntBASIC20.75■□□□□ 0.91
Gm3604A0A087WPN2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Gm3604A0A087WPN2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3604A0A087WPN2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3604A0A087WPN2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3604A0A087WPN2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3604A0A087WPN2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3604A0A087WPN2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3604A0A087WPN2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm3604A0A087WPN2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm3604A0A087WPN2 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.74■□□□□ 0.91
Gm3604A0A087WPN2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.74■□□□□ 0.91
Gm3604A0A087WPN2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm3604A0A087WPN2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm3604A0A087WPN2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm3604A0A087WPN2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm3604A0A087WPN2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm3604A0A087WPN2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3604A0A087WPN2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3604A0A087WPN2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.73■□□□□ 0.91
Gm3604A0A087WPN2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3604A0A087WPN2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3604A0A087WPN2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3604A0A087WPN2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3604A0A087WPN2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
Gm3604A0A087WPN2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3604A0A087WPN2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.72■□□□□ 0.91
Gm3604A0A087WPN2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3604A0A087WPN2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3604A0A087WPN2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.72■□□□□ 0.91
Gm3604A0A087WPN2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Gm3604A0A087WPN2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Gm3604A0A087WPN2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
Gm3604A0A087WPN2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.72■□□□□ 0.91
Gm3604A0A087WPN2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3604A0A087WPN2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3604A0A087WPN2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3604A0A087WPN2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3604A0A087WPN2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3604A0A087WPN2 Gm12922-201ENSMUST00000120626 809 ntBASIC20.71■□□□□ 0.91
Gm3604A0A087WPN2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3604A0A087WPN2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3604A0A087WPN2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3604A0A087WPN2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.71■□□□□ 0.91
Gm3604A0A087WPN2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3604A0A087WPN2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3604A0A087WPN2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3604A0A087WPN2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3604A0A087WPN2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3604A0A087WPN2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.7■□□□□ 0.9
Gm3604A0A087WPN2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
Gm3604A0A087WPN2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.7■□□□□ 0.9
Gm3604A0A087WPN2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3604A0A087WPN2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3604A0A087WPN2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms