Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC15.59■□□□□ 0.09
Trav14n-3A0A075B645 Gm45364-201ENSMUST00000210883 159 ntBASIC15.59■□□□□ 0.09
Trav14n-3A0A075B645 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC15.59■□□□□ 0.09
Trav14n-3A0A075B645 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav14n-3A0A075B645 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav14n-3A0A075B645 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav14n-3A0A075B645 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav14n-3A0A075B645 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav14n-3A0A075B645 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav14n-3A0A075B645 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Trav14n-3A0A075B645 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav14n-3A0A075B645 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trav14n-3A0A075B645 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav14n-3A0A075B645 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav14n-3A0A075B645 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Trav14n-3A0A075B645 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.58■□□□□ 0.08
Trav14n-3A0A075B645 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav14n-3A0A075B645 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav14n-3A0A075B645 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Trav14n-3A0A075B645 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.58■□□□□ 0.08
Trav14n-3A0A075B645 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav14n-3A0A075B645 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav14n-3A0A075B645 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav14n-3A0A075B645 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav14n-3A0A075B645 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav14n-3A0A075B645 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav14n-3A0A075B645 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav14n-3A0A075B645 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.57■□□□□ 0.08
Trav14n-3A0A075B645 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav14n-3A0A075B645 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav14n-3A0A075B645 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav14n-3A0A075B645 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav14n-3A0A075B645 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav14n-3A0A075B645 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav14n-3A0A075B645 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav14n-3A0A075B645 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trav14n-3A0A075B645 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav14n-3A0A075B645 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav14n-3A0A075B645 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav14n-3A0A075B645 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.56■□□□□ 0.08
Trav14n-3A0A075B645 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav14n-3A0A075B645 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trav14n-3A0A075B645 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav14n-3A0A075B645 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav14n-3A0A075B645 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav14n-3A0A075B645 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav14n-3A0A075B645 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav14n-3A0A075B645 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav14n-3A0A075B645 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav14n-3A0A075B645 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav14n-3A0A075B645 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav14n-3A0A075B645 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav14n-3A0A075B645 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav14n-3A0A075B645 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav14n-3A0A075B645 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav14n-3A0A075B645 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Trav14n-3A0A075B645 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav14n-3A0A075B645 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav14n-3A0A075B645 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav14n-3A0A075B645 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav14n-3A0A075B645 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav14n-3A0A075B645 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Trav14n-3A0A075B645 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav14n-3A0A075B645 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav14n-3A0A075B645 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav14n-3A0A075B645 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav14n-3A0A075B645 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav14n-3A0A075B645 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav14n-3A0A075B645 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav14n-3A0A075B645 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Trav14n-3A0A075B645 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav14n-3A0A075B645 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav14n-3A0A075B645 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Trav14n-3A0A075B645 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav14n-3A0A075B645 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Trav14n-3A0A075B645 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav14n-3A0A075B645 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav14n-3A0A075B645 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav14n-3A0A075B645 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav14n-3A0A075B645 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav14n-3A0A075B645 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav14n-3A0A075B645 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav14n-3A0A075B645 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav14n-3A0A075B645 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav14n-3A0A075B645 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav14n-3A0A075B645 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC15.53■□□□□ 0.08
Trav14n-3A0A075B645 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav14n-3A0A075B645 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav14n-3A0A075B645 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav14n-3A0A075B645 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav14n-3A0A075B645 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav14n-3A0A075B645 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav14n-3A0A075B645 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav14n-3A0A075B645 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav14n-3A0A075B645 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav14n-3A0A075B645 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav14n-3A0A075B645 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav14n-3A0A075B645 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav14n-3A0A075B645 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav14n-3A0A075B645 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms