Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav4d-3A0A075B625 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav4d-3A0A075B625 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4d-3A0A075B625 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4d-3A0A075B625 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4d-3A0A075B625 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.04□□□□□ -0.16
Trav4d-3A0A075B625 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Trav4d-3A0A075B625 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4d-3A0A075B625 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4d-3A0A075B625 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav4d-3A0A075B625 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4d-3A0A075B625 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4d-3A0A075B625 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4d-3A0A075B625 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4d-3A0A075B625 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav4d-3A0A075B625 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4d-3A0A075B625 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4d-3A0A075B625 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav4d-3A0A075B625 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4d-3A0A075B625 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4d-3A0A075B625 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4d-3A0A075B625 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav4d-3A0A075B625 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav4d-3A0A075B625 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav4d-3A0A075B625 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav4d-3A0A075B625 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav4d-3A0A075B625 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav4d-3A0A075B625 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav4d-3A0A075B625 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav4d-3A0A075B625 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav4d-3A0A075B625 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav4d-3A0A075B625 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4d-3A0A075B625 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4d-3A0A075B625 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav4d-3A0A075B625 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4d-3A0A075B625 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4d-3A0A075B625 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4d-3A0A075B625 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4d-3A0A075B625 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC14□□□□□ -0.17
Trav4d-3A0A075B625 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4d-3A0A075B625 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav4d-3A0A075B625 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14□□□□□ -0.17
Trav4d-3A0A075B625 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav4d-3A0A075B625 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4d-3A0A075B625 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav4d-3A0A075B625 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4d-3A0A075B625 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4d-3A0A075B625 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4d-3A0A075B625 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4d-3A0A075B625 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4d-3A0A075B625 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav4d-3A0A075B625 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4d-3A0A075B625 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav4d-3A0A075B625 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4d-3A0A075B625 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14□□□□□ -0.17
Trav4d-3A0A075B625 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4d-3A0A075B625 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav4d-3A0A075B625 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav4d-3A0A075B625 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Trav4d-3A0A075B625 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4d-3A0A075B625 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4d-3A0A075B625 Gm13889-201ENSMUST00000099689 1386 ntBASIC13.99□□□□□ -0.17
Trav4d-3A0A075B625 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4d-3A0A075B625 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4d-3A0A075B625 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4d-3A0A075B625 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav4d-3A0A075B625 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4d-3A0A075B625 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4d-3A0A075B625 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Trav4d-3A0A075B625 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Trav4d-3A0A075B625 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC13.99□□□□□ -0.17
Trav4d-3A0A075B625 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4d-3A0A075B625 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trav4d-3A0A075B625 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4d-3A0A075B625 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4d-3A0A075B625 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4d-3A0A075B625 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4d-3A0A075B625 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4d-3A0A075B625 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4d-3A0A075B625 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav4d-3A0A075B625 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4d-3A0A075B625 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4d-3A0A075B625 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4d-3A0A075B625 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4d-3A0A075B625 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4d-3A0A075B625 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4d-3A0A075B625 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4d-3A0A075B625 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4d-3A0A075B625 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4d-3A0A075B625 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC13.98□□□□□ -0.17
Trav4d-3A0A075B625 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4d-3A0A075B625 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav4d-3A0A075B625 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC13.97□□□□□ -0.17
Trav4d-3A0A075B625 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav4d-3A0A075B625 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4d-3A0A075B625 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4d-3A0A075B625 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4d-3A0A075B625 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4d-3A0A075B625 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4d-3A0A075B625 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms