Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PdfS4R2K0 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
PdfS4R2K0 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC9.24□□□□□ -0.93
PdfS4R2K0 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PdfS4R2K0 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PdfS4R2K0 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC9.24□□□□□ -0.93
PdfS4R2K0 Gm13050-201ENSMUST00000122149 1345 ntBASIC9.24□□□□□ -0.93
PdfS4R2K0 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
PdfS4R2K0 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
PdfS4R2K0 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PdfS4R2K0 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
PdfS4R2K0 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
PdfS4R2K0 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PdfS4R2K0 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PdfS4R2K0 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PdfS4R2K0 Gm38140-201ENSMUST00000193617 2755 ntBASIC9.24□□□□□ -0.93
PdfS4R2K0 AC126257.2-201ENSMUST00000215507 2300 ntBASIC9.23□□□□□ -0.93
PdfS4R2K0 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC9.23□□□□□ -0.93
PdfS4R2K0 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
PdfS4R2K0 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Gm15544-201ENSMUST00000118776 1531 ntBASIC9.23□□□□□ -0.93
PdfS4R2K0 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Gm12390-201ENSMUST00000117897 397 ntBASIC9.23□□□□□ -0.93
PdfS4R2K0 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC9.23□□□□□ -0.93
PdfS4R2K0 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC9.23□□□□□ -0.93
PdfS4R2K0 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC9.23□□□□□ -0.93
PdfS4R2K0 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Gm45784-201ENSMUST00000188360 142 ntBASIC9.23□□□□□ -0.93
PdfS4R2K0 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC9.23□□□□□ -0.93
PdfS4R2K0 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC9.23□□□□□ -0.93
PdfS4R2K0 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC9.23□□□□□ -0.93
PdfS4R2K0 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
PdfS4R2K0 Mir339-201ENSMUST00000083659 96 ntBASIC9.23□□□□□ -0.93
PdfS4R2K0 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 AL645783.1-201ENSMUST00000221416 1832 ntBASIC9.23□□□□□ -0.93
PdfS4R2K0 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC9.23□□□□□ -0.93
PdfS4R2K0 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
PdfS4R2K0 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC9.23□□□□□ -0.93
PdfS4R2K0 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.23□□□□□ -0.93
PdfS4R2K0 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC9.23□□□□□ -0.93
PdfS4R2K0 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
PdfS4R2K0 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
PdfS4R2K0 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PdfS4R2K0 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PdfS4R2K0 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PdfS4R2K0 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PdfS4R2K0 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PdfS4R2K0 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
PdfS4R2K0 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
PdfS4R2K0 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC9.22□□□□□ -0.93
PdfS4R2K0 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
PdfS4R2K0 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC9.22□□□□□ -0.93
PdfS4R2K0 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PdfS4R2K0 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
PdfS4R2K0 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
PdfS4R2K0 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC9.22□□□□□ -0.93
PdfS4R2K0 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
PdfS4R2K0 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
PdfS4R2K0 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PdfS4R2K0 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
PdfS4R2K0 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
PdfS4R2K0 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PdfS4R2K0 Gm12539-201ENSMUST00000121549 1098 ntBASIC9.22□□□□□ -0.93
PdfS4R2K0 Gm8835-201ENSMUST00000173096 1169 ntBASIC9.22□□□□□ -0.93
PdfS4R2K0 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC9.22□□□□□ -0.93
PdfS4R2K0 Gm8652-201ENSMUST00000181363 964 ntBASIC9.22□□□□□ -0.93
PdfS4R2K0 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PdfS4R2K0 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
PdfS4R2K0 Gm43818-201ENSMUST00000200605 466 ntBASIC9.22□□□□□ -0.93
PdfS4R2K0 Gm35960-201ENSMUST00000202712 767 ntBASIC9.22□□□□□ -0.93
PdfS4R2K0 Gm7561-201ENSMUST00000211203 886 ntBASIC9.22□□□□□ -0.93
PdfS4R2K0 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms