Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Gm13226-201ENSMUST00000117838 404 ntBASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Gm6023-201ENSMUST00000118217 606 ntBASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Gm14660-201ENSMUST00000119809 575 ntBASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
H2afb3S4R1G7 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Gm12036-201ENSMUST00000120008 530 ntBASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Gm37008-201ENSMUST00000195712 319 ntBASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.82□□□□□ -0.68
H2afb3S4R1G7 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.82□□□□□ -0.68
H2afb3S4R1G7 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
H2afb3S4R1G7 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.81□□□□□ -0.68
H2afb3S4R1G7 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.81□□□□□ -0.68
H2afb3S4R1G7 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
H2afb3S4R1G7 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms