Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
Prpf40aQ9R1C7 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prpf40aQ9R1C7 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Prpf40aQ9R1C7 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prpf40aQ9R1C7 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prpf40aQ9R1C7 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prpf40aQ9R1C7 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Gm27046-201ENSMUST00000182160 463 ntBASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf40aQ9R1C7 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Paupar-201ENSMUST00000194826 3482 ntBASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Gm24830-201ENSMUST00000102024 166 ntBASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Gm22323-201ENSMUST00000103832 109 ntBASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Gm5403-201ENSMUST00000117105 2795 ntBASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Gm14109-201ENSMUST00000118814 309 ntBASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Gm27320-201ENSMUST00000184892 109 ntBASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 AC124408.1-201ENSMUST00000228938 707 ntBASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Gm9996-201ENSMUST00000070359 913 ntBASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Gm26232-201ENSMUST00000083360 166 ntBASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prpf40aQ9R1C7 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Gm23912-201ENSMUST00000104687 87 ntBASIC13.25□□□□□ -0.29
Prpf40aQ9R1C7 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 132.7 ms