Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm23119-201ENSMUST00000158610 140 ntBASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Gm27390-201ENSMUST00000184516 176 ntBASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Gm44364-201ENSMUST00000198368 141 ntBASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Gm5950-201ENSMUST00000213337 772 ntBASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61a2Q9JLR1 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Gm30285-201ENSMUST00000214614 422 ntBASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61a2Q9JLR1 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Sec61a2Q9JLR1 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Gm25043-201ENSMUST00000158604 212 ntBASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Sec61a2Q9JLR1 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms