Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.29□□□□□ -0.12
Ube3bQ9ES34 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube3bQ9ES34 Gm6867-201ENSMUST00000219165 425 ntBASIC14.29□□□□□ -0.12
Ube3bQ9ES34 Gm1821-202ENSMUST00000227415 750 ntBASIC14.29□□□□□ -0.12
Ube3bQ9ES34 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ube3bQ9ES34 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ube3bQ9ES34 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.29□□□□□ -0.12
Ube3bQ9ES34 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ube3bQ9ES34 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube3bQ9ES34 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube3bQ9ES34 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube3bQ9ES34 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube3bQ9ES34 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ube3bQ9ES34 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube3bQ9ES34 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube3bQ9ES34 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube3bQ9ES34 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ube3bQ9ES34 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
Ube3bQ9ES34 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube3bQ9ES34 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube3bQ9ES34 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ube3bQ9ES34 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.28□□□□□ -0.12
Ube3bQ9ES34 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ube3bQ9ES34 Gm13809-201ENSMUST00000117921 597 ntBASIC14.28□□□□□ -0.12
Ube3bQ9ES34 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC14.28□□□□□ -0.12
Ube3bQ9ES34 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ube3bQ9ES34 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ube3bQ9ES34 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ube3bQ9ES34 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.28□□□□□ -0.12
Ube3bQ9ES34 Gm6114-201ENSMUST00000182472 968 ntBASIC14.28□□□□□ -0.12
Ube3bQ9ES34 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ube3bQ9ES34 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ube3bQ9ES34 Gm5714-201ENSMUST00000197343 566 ntBASIC14.28□□□□□ -0.12
Ube3bQ9ES34 Gm6450-201ENSMUST00000200896 574 ntBASIC14.28□□□□□ -0.12
Ube3bQ9ES34 Gm44100-201ENSMUST00000204329 436 ntBASIC14.28□□□□□ -0.12
Ube3bQ9ES34 Gm6905-201ENSMUST00000205729 511 ntBASIC14.28□□□□□ -0.12
Ube3bQ9ES34 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ube3bQ9ES34 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ube3bQ9ES34 Ntng1-201ENSMUST00000051253 327 ntBASIC14.28□□□□□ -0.12
Ube3bQ9ES34 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ube3bQ9ES34 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube3bQ9ES34 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ube3bQ9ES34 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube3bQ9ES34 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube3bQ9ES34 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube3bQ9ES34 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ube3bQ9ES34 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ube3bQ9ES34 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ube3bQ9ES34 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ube3bQ9ES34 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC14.27□□□□□ -0.12
Ube3bQ9ES34 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ube3bQ9ES34 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ube3bQ9ES34 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ube3bQ9ES34 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ube3bQ9ES34 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ube3bQ9ES34 Gm13910-201ENSMUST00000121752 1428 ntBASIC14.27□□□□□ -0.12
Ube3bQ9ES34 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ube3bQ9ES34 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube3bQ9ES34 Gm14542-201ENSMUST00000118460 1248 ntBASIC14.27□□□□□ -0.13
Ube3bQ9ES34 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Ube3bQ9ES34 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.27□□□□□ -0.13
Ube3bQ9ES34 Gm23958-201ENSMUST00000157207 105 ntBASIC14.27□□□□□ -0.13
Ube3bQ9ES34 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC14.27□□□□□ -0.13
Ube3bQ9ES34 Gm37986-201ENSMUST00000193285 383 ntBASIC14.27□□□□□ -0.13
Ube3bQ9ES34 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC14.27□□□□□ -0.13
Ube3bQ9ES34 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube3bQ9ES34 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ube3bQ9ES34 Gm9785-201ENSMUST00000062642 1006 ntBASIC14.27□□□□□ -0.13
Ube3bQ9ES34 Gm5537-201ENSMUST00000091117 1252 ntBASIC14.27□□□□□ -0.13
Ube3bQ9ES34 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ube3bQ9ES34 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube3bQ9ES34 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube3bQ9ES34 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube3bQ9ES34 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube3bQ9ES34 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ube3bQ9ES34 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ube3bQ9ES34 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ube3bQ9ES34 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.27□□□□□ -0.13
Ube3bQ9ES34 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Ube3bQ9ES34 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube3bQ9ES34 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ube3bQ9ES34 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ube3bQ9ES34 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube3bQ9ES34 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube3bQ9ES34 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube3bQ9ES34 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3bQ9ES34 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms