Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.78□□□□□ -0.52
Rrp8Q9DB85 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Gm14193-201ENSMUST00000105067 153 ntBASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Gm11949-201ENSMUST00000117640 372 ntBASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Gm14247-201ENSMUST00000120950 237 ntBASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.78□□□□□ -0.52
Rrp8Q9DB85 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Gm8492-201ENSMUST00000182375 987 ntBASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.78□□□□□ -0.52
Rrp8Q9DB85 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rrp8Q9DB85 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rrp8Q9DB85 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rrp8Q9DB85 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rrp8Q9DB85 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rrp8Q9DB85 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Rrp8Q9DB85 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Rrp8Q9DB85 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rrp8Q9DB85 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Rrp8Q9DB85 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rrp8Q9DB85 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
Rrp8Q9DB85 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rrp8Q9DB85 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rrp8Q9DB85 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Gm22920-201ENSMUST00000102175 109 ntBASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Gm15004-201ENSMUST00000119192 630 ntBASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Gm37299-201ENSMUST00000193951 826 ntBASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Gm42518-201ENSMUST00000196277 938 ntBASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Gm18893-201ENSMUST00000198416 943 ntBASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Gm44980-201ENSMUST00000205826 314 ntBASIC11.77□□□□□ -0.53
Rrp8Q9DB85 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rrp8Q9DB85 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms