Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Chmp2aQ9DB34 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Gm18711-201ENSMUST00000199341 750 ntBASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Gm17812-201ENSMUST00000204935 318 ntBASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Gm8913-201ENSMUST00000209491 641 ntBASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Mir433-201ENSMUST00000093564 124 ntBASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.53□□□□□ -0.4
Chmp2aQ9DB34 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chmp2aQ9DB34 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chmp2aQ9DB34 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.52□□□□□ -0.4
Chmp2aQ9DB34 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.52□□□□□ -0.4
Chmp2aQ9DB34 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Chmp2aQ9DB34 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chmp2aQ9DB34 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Chmp2aQ9DB34 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Chmp2aQ9DB34 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.52□□□□□ -0.4
Chmp2aQ9DB34 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Chmp2aQ9DB34 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2aQ9DB34 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2aQ9DB34 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp2aQ9DB34 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms