Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Gm11618-201ENSMUST00000117946 267 ntBASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Gm24245-201ENSMUST00000157318 57 ntBASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Gm22121-201ENSMUST00000175148 54 ntBASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Gm27306-201ENSMUST00000183970 107 ntBASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.11□□□□□ -0.47
Sf3a3Q9D554 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Snord83b-201ENSMUST00000104546 94 ntBASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Gm26185-201ENSMUST00000157692 266 ntBASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Gm27243-201ENSMUST00000183964 521 ntBASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Gm43575-201ENSMUST00000196420 516 ntBASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.1□□□□□ -0.47
Sf3a3Q9D554 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Rgr-203ENSMUST00000225070 4704 ntBASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.1□□□□□ -0.47
Sf3a3Q9D554 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sf3a3Q9D554 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Gm14719-201ENSMUST00000121891 340 ntBASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Gm24694-201ENSMUST00000180054 110 ntBASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Gm27663-201ENSMUST00000184839 110 ntBASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Gm9136-201ENSMUST00000193368 454 ntBASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Gm2756-201ENSMUST00000195851 400 ntBASIC12.09□□□□□ -0.47
Sf3a3Q9D554 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms