Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.32□□□□□ -0.12
Stag1Q9D3E6 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Gm8815-201ENSMUST00000173809 620 ntBASIC14.32□□□□□ -0.12
Stag1Q9D3E6 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.32□□□□□ -0.12
Stag1Q9D3E6 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 AC154290.1-201ENSMUST00000223786 1240 ntBASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Gm9387-201ENSMUST00000098624 1320 ntBASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Stag1Q9D3E6 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Stag1Q9D3E6 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Gm15566-201ENSMUST00000121130 590 ntBASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Gm4310-201ENSMUST00000177847 889 ntBASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Stag1Q9D3E6 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Stag1Q9D3E6 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Gm18974-201ENSMUST00000221478 1031 ntBASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Stag1Q9D3E6 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Gm43807-201ENSMUST00000200678 1781 ntBASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Stag1Q9D3E6 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Gm14150-201ENSMUST00000122404 1354 ntBASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Gm13910-201ENSMUST00000121752 1428 ntBASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Stag1Q9D3E6 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Gm15207-201ENSMUST00000119259 442 ntBASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Gm45550-201ENSMUST00000209380 946 ntBASIC14.3□□□□□ -0.12
Stag1Q9D3E6 AC171241.1-201ENSMUST00000228144 1166 ntBASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Gm5537-201ENSMUST00000091117 1252 ntBASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stag1Q9D3E6 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms