Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Gm23119-201ENSMUST00000158610 140 ntBASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Gm11597-201ENSMUST00000121423 964 ntBASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim13Q9CYB0 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Gm24196-201ENSMUST00000179161 110 ntBASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Gm18304-201ENSMUST00000189162 546 ntBASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Gm6007-201ENSMUST00000208170 823 ntBASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.1□□□□□ -0.63
Trim13Q9CYB0 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.1□□□□□ -0.63
Trim13Q9CYB0 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms