Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf135Q9CWS1 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rnf135Q9CWS1 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf135Q9CWS1 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.52□□□□□ -0.41
Rnf135Q9CWS1 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Rnf135Q9CWS1 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf135Q9CWS1 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf135Q9CWS1 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf135Q9CWS1 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Gm25043-201ENSMUST00000158604 212 ntBASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf135Q9CWS1 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Gm2546-201ENSMUST00000182630 991 ntBASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Gm28882-201ENSMUST00000185504 314 ntBASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Gm9136-201ENSMUST00000193368 454 ntBASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Rps4l-202ENSMUST00000204242 789 ntBASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf135Q9CWS1 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms