Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Gm9083-201ENSMUST00000120423 819 ntBASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Gm22906-201ENSMUST00000175191 250 ntBASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Gm37201-201ENSMUST00000191845 523 ntBASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Gm6621-201ENSMUST00000193251 772 ntBASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Olfr863-ps1-201ENSMUST00000213073 929 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 AC151902.1-201ENSMUST00000227800 375 ntBASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 AC132918.1-201ENSMUST00000227877 925 ntBASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Rubie-203ENSMUST00000227803 2430 ntBASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Retreg3Q9CQV4 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 BC043934-202ENSMUST00000185694 2356 ntBASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Gm13570-201ENSMUST00000140763 309 ntBASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Gm38233-201ENSMUST00000194259 807 ntBASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Retreg3Q9CQV4 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retreg3Q9CQV4 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.47□□□□□ -0.41
Retreg3Q9CQV4 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retreg3Q9CQV4 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.47□□□□□ -0.41
Retreg3Q9CQV4 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retreg3Q9CQV4 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retreg3Q9CQV4 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retreg3Q9CQV4 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retreg3Q9CQV4 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retreg3Q9CQV4 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retreg3Q9CQV4 AC132384.4-201ENSMUST00000220343 1397 ntBASIC12.47□□□□□ -0.41
Retreg3Q9CQV4 Mterf1a-201ENSMUST00000044746 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retreg3Q9CQV4 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms