Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Gm8566-201ENSMUST00000120174 465 ntBASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Gm20426-201ENSMUST00000173657 440 ntBASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Gm8959-201ENSMUST00000213150 571 ntBASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Gm9797-202ENSMUST00000218003 294 ntBASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm7Q9CQQ8 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Gm7851-201ENSMUST00000117574 323 ntBASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm7Q9CQQ8 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm7Q9CQQ8 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm7Q9CQQ8 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm7Q9CQQ8 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Lsm7Q9CQQ8 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm7Q9CQQ8 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm7Q9CQQ8 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm7Q9CQQ8 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm7Q9CQQ8 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm7Q9CQQ8 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm7Q9CQQ8 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm7Q9CQQ8 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.1□□□□□ -0.47
Lsm7Q9CQQ8 Gm23251-201ENSMUST00000103773 110 ntBASIC12.1□□□□□ -0.47
Lsm7Q9CQQ8 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.1□□□□□ -0.47
Lsm7Q9CQQ8 Gm15004-201ENSMUST00000119192 630 ntBASIC12.1□□□□□ -0.47
Lsm7Q9CQQ8 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Lsm7Q9CQQ8 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.1□□□□□ -0.47
Lsm7Q9CQQ8 Gm15432-201ENSMUST00000121106 195 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms