Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RTRAFQ9CQE8 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Gm13689-201ENSMUST00000119360 685 ntBASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Gm19972-201ENSMUST00000218180 5664 ntBASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RTRAFQ9CQE8 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Gm28719-201ENSMUST00000187779 1757 ntBASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Gm26308-201ENSMUST00000157768 69 ntBASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Gm6983-201ENSMUST00000214912 628 ntBASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 AC108858.2-201ENSMUST00000228186 1425 ntBASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Gm37931-201ENSMUST00000194686 2866 ntBASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTRAFQ9CQE8 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms