Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Krt88Q9CPR6 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Gm11918-201ENSMUST00000121660 179 ntBASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Gm5904-201ENSMUST00000210286 865 ntBASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Gm45384-201ENSMUST00000210451 277 ntBASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Gm45925-201ENSMUST00000218882 744 ntBASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Gm5781-201ENSMUST00000219792 443 ntBASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Krt88Q9CPR6 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Ighv5-13-201ENSMUST00000193550 290 ntBASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Krt88Q9CPR6 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms