Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.72□□□□□ -0.53
Msh4Q99MT2 Gm42599-201ENSMUST00000201308 469 ntBASIC11.72□□□□□ -0.53
Msh4Q99MT2 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.72□□□□□ -0.53
Msh4Q99MT2 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Gm10312-201ENSMUST00000078515 489 ntBASIC11.72□□□□□ -0.53
Msh4Q99MT2 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.72□□□□□ -0.53
Msh4Q99MT2 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Msh4Q99MT2 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Msh4Q99MT2 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.71□□□□□ -0.53
Msh4Q99MT2 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Msh4Q99MT2 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Gm18304-201ENSMUST00000189162 546 ntBASIC11.71□□□□□ -0.53
Msh4Q99MT2 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Msh4Q99MT2 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.71□□□□□ -0.53
Msh4Q99MT2 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Msh4Q99MT2 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Msh4Q99MT2 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.71□□□□□ -0.54
Msh4Q99MT2 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Msh4Q99MT2 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.71□□□□□ -0.54
Msh4Q99MT2 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Msh4Q99MT2 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.71□□□□□ -0.54
Msh4Q99MT2 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Msh4Q99MT2 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Msh4Q99MT2 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Msh4Q99MT2 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.71□□□□□ -0.54
Msh4Q99MT2 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Msh4Q99MT2 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Msh4Q99MT2 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Msh4Q99MT2 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.7□□□□□ -0.54
Msh4Q99MT2 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Msh4Q99MT2 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Msh4Q99MT2 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Msh4Q99MT2 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Msh4Q99MT2 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Msh4Q99MT2 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Msh4Q99MT2 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Msh4Q99MT2 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.7□□□□□ -0.54
Msh4Q99MT2 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Msh4Q99MT2 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Msh4Q99MT2 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Msh4Q99MT2 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.7□□□□□ -0.54
Msh4Q99MT2 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Msh4Q99MT2 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Msh4Q99MT2 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Msh4Q99MT2 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Msh4Q99MT2 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Msh4Q99MT2 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Msh4Q99MT2 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Msh4Q99MT2 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.7□□□□□ -0.54
Msh4Q99MT2 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.7□□□□□ -0.54
Msh4Q99MT2 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Msh4Q99MT2 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Msh4Q99MT2 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Msh4Q99MT2 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Msh4Q99MT2 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Msh4Q99MT2 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.7□□□□□ -0.54
Msh4Q99MT2 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.7□□□□□ -0.54
Msh4Q99MT2 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms