Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Gm37782-201ENSMUST00000194879 678 ntBASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Gm43912-201ENSMUST00000204352 538 ntBASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Gm18968-201ENSMUST00000221319 862 ntBASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 AC142266.1-201ENSMUST00000228107 415 ntBASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Gm10580-201ENSMUST00000097985 396 ntBASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Gm10581-201ENSMUST00000097986 231 ntBASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Gm10582-201ENSMUST00000097987 396 ntBASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Gm10583-201ENSMUST00000097988 396 ntBASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col25a1Q99MQ5 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Gm11560-201ENSMUST00000117567 948 ntBASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Gm14993-201ENSMUST00000121180 164 ntBASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Gm24248-201ENSMUST00000157321 322 ntBASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Mir6953-201ENSMUST00000184745 68 ntBASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Gm18552-201ENSMUST00000187425 538 ntBASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Gm2345-201ENSMUST00000193451 589 ntBASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Gm3726-201ENSMUST00000203110 785 ntBASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Gm16380-201ENSMUST00000077997 478 ntBASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col25a1Q99MQ5 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms