Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.67□□□□□ -0.54
Rnf111Q99ML9 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Gm12058-201ENSMUST00000118614 437 ntBASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Gm2546-201ENSMUST00000182630 991 ntBASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Gm37489-201ENSMUST00000191883 159 ntBASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Olfr284-202ENSMUST00000206647 966 ntBASIC11.66□□□□□ -0.54
Rnf111Q99ML9 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Gm10076-201ENSMUST00000073238 384 ntBASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Rnf111Q99ML9 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.65□□□□□ -0.54
Rnf111Q99ML9 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Gm14999-201ENSMUST00000121039 624 ntBASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Gm13786-201ENSMUST00000122371 333 ntBASIC11.65□□□□□ -0.54
Rnf111Q99ML9 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Gm18304-201ENSMUST00000189162 546 ntBASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Gm36991-201ENSMUST00000191800 648 ntBASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Gm2594-201ENSMUST00000214774 742 ntBASIC11.65□□□□□ -0.54
Rnf111Q99ML9 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Gm6991-201ENSMUST00000218475 1178 ntBASIC11.65□□□□□ -0.54
Rnf111Q99ML9 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Rnf111Q99ML9 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.65□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms