Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm17889-201ENSMUST00000198410 598 ntBASIC12.67□□□□□ -0.38
Clp1Q99LI9 Gm6450-201ENSMUST00000200896 574 ntBASIC12.67□□□□□ -0.38
Clp1Q99LI9 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.67□□□□□ -0.38
Clp1Q99LI9 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.67□□□□□ -0.38
Clp1Q99LI9 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clp1Q99LI9 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Clp1Q99LI9 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Clp1Q99LI9 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clp1Q99LI9 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clp1Q99LI9 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clp1Q99LI9 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Clp1Q99LI9 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clp1Q99LI9 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.67□□□□□ -0.38
Clp1Q99LI9 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.67□□□□□ -0.38
Clp1Q99LI9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clp1Q99LI9 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clp1Q99LI9 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Clp1Q99LI9 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC12.66□□□□□ -0.38
Clp1Q99LI9 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Gm25201-201ENSMUST00000083093 170 ntBASIC12.66□□□□□ -0.38
Clp1Q99LI9 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clp1Q99LI9 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clp1Q99LI9 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clp1Q99LI9 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clp1Q99LI9 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clp1Q99LI9 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clp1Q99LI9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clp1Q99LI9 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clp1Q99LI9 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clp1Q99LI9 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clp1Q99LI9 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clp1Q99LI9 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clp1Q99LI9 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clp1Q99LI9 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Clp1Q99LI9 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clp1Q99LI9 Gm12990-201ENSMUST00000120372 468 ntBASIC12.65□□□□□ -0.38
Clp1Q99LI9 Gm11980-201ENSMUST00000121445 986 ntBASIC12.65□□□□□ -0.38
Clp1Q99LI9 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.65□□□□□ -0.38
Clp1Q99LI9 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clp1Q99LI9 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clp1Q99LI9 Gm28975-201ENSMUST00000186412 686 ntBASIC12.65□□□□□ -0.38
Clp1Q99LI9 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clp1Q99LI9 Gm7940-201ENSMUST00000218195 769 ntBASIC12.65□□□□□ -0.38
Clp1Q99LI9 Gm9139-201ENSMUST00000218817 700 ntBASIC12.65□□□□□ -0.38
Clp1Q99LI9 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clp1Q99LI9 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clp1Q99LI9 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clp1Q99LI9 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clp1Q99LI9 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.65□□□□□ -0.38
Clp1Q99LI9 Gm5403-201ENSMUST00000117105 2795 ntBASIC12.65□□□□□ -0.38
Clp1Q99LI9 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.65□□□□□ -0.38
Clp1Q99LI9 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clp1Q99LI9 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clp1Q99LI9 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clp1Q99LI9 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Clp1Q99LI9 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clp1Q99LI9 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clp1Q99LI9 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clp1Q99LI9 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clp1Q99LI9 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Clp1Q99LI9 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Clp1Q99LI9 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Clp1Q99LI9 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clp1Q99LI9 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms