Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm43758-201ENSMUST00000199500 367 ntBASIC12.68□□□□□ -0.38
Usp11Q99K46 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.68□□□□□ -0.38
Usp11Q99K46 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp11Q99K46 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp11Q99K46 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp11Q99K46 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Usp11Q99K46 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Usp11Q99K46 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp11Q99K46 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp11Q99K46 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.68□□□□□ -0.38
Usp11Q99K46 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp11Q99K46 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.68□□□□□ -0.38
Usp11Q99K46 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp11Q99K46 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp11Q99K46 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp11Q99K46 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Usp11Q99K46 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp11Q99K46 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp11Q99K46 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp11Q99K46 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Usp11Q99K46 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp11Q99K46 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp11Q99K46 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Usp11Q99K46 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.67□□□□□ -0.38
Usp11Q99K46 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Usp11Q99K46 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.67□□□□□ -0.38
Usp11Q99K46 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Usp11Q99K46 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Usp11Q99K46 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 Gm25214-201ENSMUST00000104573 129 ntBASIC12.67□□□□□ -0.38
Usp11Q99K46 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Usp11Q99K46 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.67□□□□□ -0.38
Usp11Q99K46 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 Gm27390-201ENSMUST00000184516 176 ntBASIC12.67□□□□□ -0.38
Usp11Q99K46 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.67□□□□□ -0.38
Usp11Q99K46 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Usp11Q99K46 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.67□□□□□ -0.38
Usp11Q99K46 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.67□□□□□ -0.38
Usp11Q99K46 Gm38341-201ENSMUST00000195357 515 ntBASIC12.67□□□□□ -0.38
Usp11Q99K46 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.67□□□□□ -0.38
Usp11Q99K46 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 Gm30285-201ENSMUST00000214614 422 ntBASIC12.67□□□□□ -0.38
Usp11Q99K46 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.67□□□□□ -0.38
Usp11Q99K46 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 Gm10076-201ENSMUST00000073238 384 ntBASIC12.67□□□□□ -0.38
Usp11Q99K46 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.67□□□□□ -0.38
Usp11Q99K46 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Usp11Q99K46 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.67□□□□□ -0.38
Usp11Q99K46 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Usp11Q99K46 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Usp11Q99K46 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.66□□□□□ -0.38
Usp11Q99K46 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp11Q99K46 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp11Q99K46 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.66□□□□□ -0.38
Usp11Q99K46 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp11Q99K46 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Usp11Q99K46 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp11Q99K46 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Usp11Q99K46 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.66□□□□□ -0.38
Usp11Q99K46 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.66□□□□□ -0.38
Usp11Q99K46 Gm14999-201ENSMUST00000121039 624 ntBASIC12.66□□□□□ -0.38
Usp11Q99K46 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.66□□□□□ -0.38
Usp11Q99K46 Gm39404-201ENSMUST00000216350 313 ntBASIC12.66□□□□□ -0.38
Usp11Q99K46 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.66□□□□□ -0.38
Usp11Q99K46 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp11Q99K46 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp11Q99K46 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp11Q99K46 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Usp11Q99K46 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usp11Q99K46 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.66□□□□□ -0.38
Usp11Q99K46 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp11Q99K46 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usp11Q99K46 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.65□□□□□ -0.38
Usp11Q99K46 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp11Q99K46 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms