Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clip1Q922J3 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clip1Q922J3 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC18.69■□□□□ 0.58
Clip1Q922J3 Gm13182-201ENSMUST00000122241 312 ntBASIC18.69■□□□□ 0.58
Clip1Q922J3 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC18.69■□□□□ 0.58
Clip1Q922J3 Gm37028-201ENSMUST00000194276 107 ntBASIC18.69■□□□□ 0.58
Clip1Q922J3 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip1Q922J3 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC18.69■□□□□ 0.58
Clip1Q922J3 AC166341.2-201ENSMUST00000220571 120 ntBASIC18.69■□□□□ 0.58
Clip1Q922J3 CT025551.1-201ENSMUST00000223996 692 ntBASIC18.69■□□□□ 0.58
Clip1Q922J3 Kcnk16-202ENSMUST00000225596 2127 ntBASIC18.69■□□□□ 0.58
Clip1Q922J3 CT025553.1-201ENSMUST00000226292 299 ntBASIC18.69■□□□□ 0.58
Clip1Q922J3 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip1Q922J3 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip1Q922J3 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clip1Q922J3 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip1Q922J3 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip1Q922J3 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Clip1Q922J3 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip1Q922J3 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clip1Q922J3 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip1Q922J3 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Clip1Q922J3 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip1Q922J3 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip1Q922J3 Gm8522-201ENSMUST00000118416 1929 ntBASIC18.69■□□□□ 0.58
Clip1Q922J3 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip1Q922J3 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip1Q922J3 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip1Q922J3 AC125108.1-201ENSMUST00000218986 2330 ntBASIC18.69■□□□□ 0.58
Clip1Q922J3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clip1Q922J3 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clip1Q922J3 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC18.69■□□□□ 0.58
Clip1Q922J3 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip1Q922J3 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip1Q922J3 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC18.68■□□□□ 0.58
Clip1Q922J3 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC18.68■□□□□ 0.58
Clip1Q922J3 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Clip1Q922J3 Gm17877-201ENSMUST00000192578 814 ntBASIC18.68■□□□□ 0.58
Clip1Q922J3 Gm37981-201ENSMUST00000194280 535 ntBASIC18.68■□□□□ 0.58
Clip1Q922J3 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Clip1Q922J3 AC099645.1-201ENSMUST00000226476 1105 ntBASIC18.68■□□□□ 0.58
Clip1Q922J3 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Clip1Q922J3 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC18.68■□□□□ 0.58
Clip1Q922J3 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Clip1Q922J3 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Clip1Q922J3 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip1Q922J3 Zfp125-201ENSMUST00000079237 2488 ntBASIC18.68■□□□□ 0.58
Clip1Q922J3 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip1Q922J3 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Clip1Q922J3 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip1Q922J3 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip1Q922J3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip1Q922J3 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip1Q922J3 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip1Q922J3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip1Q922J3 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Clip1Q922J3 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip1Q922J3 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Clip1Q922J3 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip1Q922J3 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Clip1Q922J3 Gm6114-201ENSMUST00000182472 968 ntBASIC18.68■□□□□ 0.58
Clip1Q922J3 Gm28324-201ENSMUST00000187913 264 ntBASIC18.68■□□□□ 0.58
Clip1Q922J3 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC18.68■□□□□ 0.58
Clip1Q922J3 Gm9661-201ENSMUST00000221611 1122 ntBASIC18.68■□□□□ 0.58
Clip1Q922J3 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC18.68■□□□□ 0.58
Clip1Q922J3 Gm19009-201ENSMUST00000223072 823 ntBASIC18.68■□□□□ 0.58
Clip1Q922J3 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip1Q922J3 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Clip1Q922J3 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip1Q922J3 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC18.67■□□□□ 0.58
Clip1Q922J3 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC18.67■□□□□ 0.58
Clip1Q922J3 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip1Q922J3 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip1Q922J3 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip1Q922J3 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Clip1Q922J3 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip1Q922J3 Gm26013-201ENSMUST00000104404 119 ntBASIC18.67■□□□□ 0.58
Clip1Q922J3 Gm4993-201ENSMUST00000118719 1174 ntBASIC18.67■□□□□ 0.58
Clip1Q922J3 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip1Q922J3 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Clip1Q922J3 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Clip1Q922J3 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Clip1Q922J3 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Clip1Q922J3 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clip1Q922J3 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clip1Q922J3 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clip1Q922J3 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clip1Q922J3 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clip1Q922J3 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clip1Q922J3 Gm42748-201ENSMUST00000199354 2341 ntBASIC18.66■□□□□ 0.58
Clip1Q922J3 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clip1Q922J3 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clip1Q922J3 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clip1Q922J3 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clip1Q922J3 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Clip1Q922J3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clip1Q922J3 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clip1Q922J3 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clip1Q922J3 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Clip1Q922J3 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms