Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Gm12029-201ENSMUST00000120073 832 ntBASIC12.6□□□□□ -0.39
Pcdhb18Q91Y02 Gm15782-201ENSMUST00000121073 445 ntBASIC12.6□□□□□ -0.39
Pcdhb18Q91Y02 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhb18Q91Y02 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Pcdhb18Q91Y02 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.6□□□□□ -0.39
Pcdhb18Q91Y02 Gm2965-201ENSMUST00000198365 343 ntBASIC12.6□□□□□ -0.39
Pcdhb18Q91Y02 Gm18711-201ENSMUST00000199341 750 ntBASIC12.6□□□□□ -0.39
Pcdhb18Q91Y02 Gm43916-201ENSMUST00000205062 967 ntBASIC12.6□□□□□ -0.39
Pcdhb18Q91Y02 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.6□□□□□ -0.39
Pcdhb18Q91Y02 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb18Q91Y02 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb18Q91Y02 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb18Q91Y02 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb18Q91Y02 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb18Q91Y02 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb18Q91Y02 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb18Q91Y02 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb18Q91Y02 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhb18Q91Y02 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb18Q91Y02 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.6□□□□□ -0.39
Pcdhb18Q91Y02 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb18Q91Y02 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb18Q91Y02 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb18Q91Y02 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb18Q91Y02 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb18Q91Y02 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Gm26286-201ENSMUST00000104166 134 ntBASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Gm23912-201ENSMUST00000104687 87 ntBASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Gm11667-201ENSMUST00000119828 486 ntBASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Gm12208-201ENSMUST00000122004 163 ntBASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb18Q91Y02 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.58□□□□□ -0.39
Pcdhb18Q91Y02 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdhb18Q91Y02 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Gm17391-201ENSMUST00000171036 126 ntBASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Gm28686-201ENSMUST00000187404 609 ntBASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Gm10774-201ENSMUST00000188689 204 ntBASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Gm44551-201ENSMUST00000208804 171 ntBASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb18Q91Y02 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhb18Q91Y02 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb18Q91Y02 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb18Q91Y02 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhb18Q91Y02 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms