Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Gm42449-201ENSMUST00000200349 2258 ntBASIC12.25□□□□□ -0.45
Pcdhb3Q91XZ7 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Gm12742-201ENSMUST00000117326 410 ntBASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Gm5687-201ENSMUST00000118252 640 ntBASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Tprkb-202ENSMUST00000089570 1216 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhb3Q91XZ7 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Gm6447-201ENSMUST00000118905 835 ntBASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Gm14660-201ENSMUST00000119809 575 ntBASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Gm8185-201ENSMUST00000160999 669 ntBASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Gm3159-203ENSMUST00000177764 618 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms