Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh18Q8VHR0 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh18Q8VHR0 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh18Q8VHR0 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh18Q8VHR0 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh18Q8VHR0 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh18Q8VHR0 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh18Q8VHR0 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh18Q8VHR0 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh18Q8VHR0 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh18Q8VHR0 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Pcdh18Q8VHR0 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh18Q8VHR0 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.64□□□□□ -0.55
Pcdh18Q8VHR0 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh18Q8VHR0 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.64□□□□□ -0.55
Pcdh18Q8VHR0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdh18Q8VHR0 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Gm5035-201ENSMUST00000215581 927 ntBASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh18Q8VHR0 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.62□□□□□ -0.55
Pcdh18Q8VHR0 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms