Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Gm24934-201ENSMUST00000103764 111 ntBASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Gm11918-201ENSMUST00000121660 179 ntBASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Gm42693-201ENSMUST00000196779 631 ntBASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC9.77□□□□□ -0.85
Nup35Q8R4R6 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 AC154671.1-201ENSMUST00000228617 1578 ntBASIC9.76□□□□□ -0.85
Nup35Q8R4R6 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Gm5706-201ENSMUST00000181525 993 ntBASIC9.76□□□□□ -0.85
Nup35Q8R4R6 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Gm8515-201ENSMUST00000194852 576 ntBASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Gm18711-201ENSMUST00000199341 750 ntBASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Gm18584-201ENSMUST00000203098 964 ntBASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nup35Q8R4R6 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms